Publications

How to Cite the Center’s Support

Please remember to cite the University of Washington Interdisciplinary Center for Exposures, Diseases, Genomics and Environment (Grant #: P30ES007033) in your publications and presentations. 

 
The National Institute of Environmental Health Sciences, our supporting agency, requires investigators who use the Center's resources and services acknowledge that support in the publications as well as any poster presentations and seminar talks. This acknowledgement also applies to recipients of Pilot Project funding. The NIH has specific guidance on how NIH grant support should be acknowledged. NIH also now requires inclusion of a disclaimer. According to NIH grants policy, all grantee publications, including research publication, press releases, other publications or documents about research that is funded by NIH must include the following statements:
 
A specific acknowledgment of NIH grant support, such as: "Research reported in this [publication/press release] was supported by The University of Washington, Center for Exposures, Diseases, Genomics and Environment, of the National Institutes of Health under award number: P30ES007033". (Please remember to reference the grant number as one continuous item without spaces between numbers and letters)

For further information, please contact Liz Guzy.

2017

  1. Bell G, Mora S, Greenland P, Tsai M, Gill E, Kaufman JD. Association of Air Pollution Exposures With High-Density Lipoprotein Cholesterol and Particle Number: The Multi-Ethnic Study of Atherosclerosis. Arteriosclerosis, thrombosis, and vascular biology. 2017;37(5):976-82. PMID: 28408373;  PMCID: Pmc5407952.
  2. Chang YC, Cole TB, Costa LG. Behavioral Phenotyping for Autism Spectrum Disorders in Mice. Current protocols in toxicology. 2017;72:11.22.1-11.22.1. PMID: 28463420;  PMCID: Pmc5494990.
  3. Costa LG, Cole TB, Coburn J, Chang YC, Dao K, Roque PJ. Neurotoxicity of traffic-related air pollution. Neurotoxicology. 2017;59:133-9. PMID: 26610921;  PMCID: Pmc4875879.
  4. Dempsey JL, Cui JY. Long Non-Coding RNAs: A Novel Paradigm for Toxicology. Toxicological sciences : an official journal of the Society of Toxicology. 2017;155(1):3-21. PMID: 27864543;  PMCID: Pmc5216656.
  5. Eddy WE, Gong KQ, Bell B, Parks WC, Ziegler SF, Manicone AM. Stat5 Is Required for CD103+ Dendritic Cell and Alveolar Macrophage Development and Protection from Lung Injury. Journal of immunology (Baltimore, Md : 1950). 2017;198(12):4813-22. PMID: 28500076;  PMCID: Pmc5624516.
  6. Hart R, Veenstra DL, Boudreau DM, Roth JA. Impact of Body Mass Index and Genetics on Warfarin Major Bleeding Outcomes in a Community Setting. The American journal of medicine. 2017;130(2):222-8. PMID: 27593608;  PMCID: Pmc5263176.
  7. Hines KM, Herron J, Xu L. Assessment of altered lipid homeostasis by HILIC-ion mobility-mass spectrometry-based lipidomics. Journal of lipid research. 2017;58(4):809-19. PMID: 28167702;  PMCID: Pmc5392737.
  8. Honda T, Eliot MN, Eaton CB, Whitsel E, Stewart JD, Mu L, Suh H, Szpiro A, Kaufman JD, Vedal S, Wellenius GA. Long-term exposure to residential ambient fine and coarse particulate matter and incident hypertension in post-menopausal women. Environment international. 2017;105:79-85. PMID: 28521192;  PMCID: Pmc5532534.
  9. Keller JP, Drton M, Larson T, Kaufman JD, Sandler DP, Szpiro AA. COVARIATE-ADAPTIVE CLUSTERING OF EXPOSURES FOR AIR POLLUTION EPIDEMIOLOGY COHORTS. The annals of applied statistics. 2017;11(1):93-113. PMID: 28572869;  PMCID: Pmc5448716.
  10. Kulick ER, Wellenius GA, Kaufman JD, DeRosa JT, Kinney PL, Cheung YK, Wright CB, Sacco RL, Elkind MS. Long-Term Exposure to Ambient Air Pollution and Subclinical Cerebrovascular Disease in NOMAS (the Northern Manhattan Study). Stroke. 2017;48(7):1966-8. PMID: 28455324;  PMCID: Pmc5487287.
  11. Manicone AM, Gharib SA, Gong KQ, Eddy WE, Long ME, Frevert CW, Altemeier WA, Parks WC, Houghton AM. Matrix Metalloproteinase-28 Is a Key Contributor to Emphysema Pathogenesis. The American journal of pathology. 2017;187(6):1288-300. PMID: 28399390;  PMCID: Pmc5455063.
  12. Neradugomma NK, Liao MZ, Mao Q. Buprenorphine, Norbuprenorphine, R-Methadone, and S-Methadone Upregulate BCRP/ABCG2 Expression by Activating Aryl Hydrocarbon Receptor in Human Placental Trophoblasts. Molecular pharmacology. 2017;91(3):237-49. PMID: 27974484;  PMCID: Pmc5325079
  13. Stanaway IB, Wallace JC, Shojaie A, Griffith WC, Hong S, Wilder CS, Green FH, Tsai J, Knight M, Workman T, Vigoren EM, McLean JS, Thompson B, Faustman EM. Human Oral Buccal Microbiomes Are Associated with Farmworker Status and Azinphos-Methyl Agricultural Pesticide Exposure. Applied and environmental microbiology. 2017;83(2). PMID: 27836847;  PMCID: Pmc5203616.
  14. Tanner JA, Prasad B, Claw KG, Stapleton P, Chaudhry A, Schuetz EG, Thummel KE, Tyndale RF. Predictors of Variation in CYP2A6 mRNA, Protein, and Enzyme Activity in a Human Liver Bank: Influence of Genetic and Nongenetic Factors. The Journal of pharmacology and experimental therapeutics. 2017;360(1):129-39. PMID: 27815364;  PMCID: Pmc5193072
  15. Van Ness KP, Chang SY, Weber EJ, Zumpano D, Eaton DL, Kelly EJ. Microphysiological Systems to Assess Nonclinical Toxicity. Current protocols in toxicology. 2017;73:14.8.1-.8.28. PMID: 28777442;  PMCID: Pmc5607027.
  16. Wander PL, Boyko EJ, Hevner K, Parikh VJ, Tadesse MG, Sorensen TK, Williams MA, Enquobahrie DA. Circulating early- and mid-pregnancy microRNAs and risk of gestational diabetes. Diabetes research and clinical practice. 2017;132:1-9. PMID: 28783527;  PMCID: Pmc5623075.
 

2016

  1. Ahn EH, Lee SH, Kim JY, Chang CC, Loeb LA. Decreased Mitochondrial Mutagenesis during Transformation of Human Breast Stem Cells into Tumorigenic Cells. Cancer research. 2016;76(15):4569-78. PMID: 27197159;  PMCID: Pmc5004738.
  2. Basisty N, Dai DF, Gagnidze A, Gitari L, Fredrickson J, Maina Y, Beyer RP, Emond MJ, Hsieh EJ, MacCoss MJ, Martin GM, Rabinovitch PS. Mitochondrial-targeted catalase is good for the old mouse proteome, but not for the young: 'reverse' antagonistic pleiotropy? Aging cell. 2016;15(4):634-45. PMID: 27061426;  PMCID: Pmc4933659.
  3. Bergen S, Sheppard L, Kaufman JD, Szpiro AA. Multipollutant measurement error in air pollution epidemiology studies arising from predicting exposures with penalized regression splines. Journal of the Royal Statistical Society Series C, Applied statistics. 2016;65(5):731-53. PMID: 27789915;  PMCID: Pmc5076926.
  4. Cartwright MM, Schmuck SC, Corredor C, Wang B, Scoville DK, Chisholm CR, Wilkerson HW, Afsharinejad Z, Bammler TK, Posner JD, Shutthanandan V, Baer DR, Mitra S, Altemeier WA, Kavanagh TJ. The pulmonary inflammatory response to multiwalled carbon nanotubes is influenced by gender and glutathione synthesis. Redox biology. 2016;9:264-75. PMID: 27596734;  PMCID: Pmc5013253.
  5. Chang SY, Weber EJ, Ness KV, Eaton DL, Kelly EJ. Liver and Kidney on Chips: Microphysiological Models to Understand Transporter Function. Clinical pharmacology and therapeutics. 2016;100(5):464-78. PMID: 27448090;  PMCID: Pmc5056140.
  6. Chi GC, Hajat A, Bird CE, Cullen MR, Griffin BA, Miller KA, Shih RA, Stefanick ML, Vedal S, Whitsel EA, Kaufman JD. Individual and Neighborhood Socioeconomic Status and the Association between Air Pollution and Cardiovascular Disease. Environmental health perspectives. 2016;124(12):1840-7. PMID: 27138533;  PMCID: PMC5132637 
  7. Chi GC, Liu Y, MacDonald JW, Barr RG, Donohue KM, Hensley MD, Hou L, McCall CE, Reynolds LM, Siscovick DS, Kaufman JD. Long-term outdoor air pollution and DNA methylation in circulating monocytes: results from the Multi-Ethnic Study of Atherosclerosis (MESA). Environmental health : a global access science source. 2016;15(1):119. PMID: 27903268;  PMCID: Pmc5131503.
  8. Cole TB, Coburn J, Dao K, Roque P, Chang YC, Kalia V, Guilarte TR, Dziedzic J, Costa LG. Sex and genetic differences in the effects of acute diesel exhaust exposure on inflammation and oxidative stress in mouse brain. Toxicology. 2016;374:1-9. PMID: 27865893;  PMCID: Pmc5154914.
  9. Costa LG, Garrick JM, Roque PJ, Pellacani C. Mechanisms of Neuroprotection by Quercetin: Counteracting Oxidative Stress and More. Oxidative medicine and cellular longevity. 2016;2016:2986796. PMID: 26904161;  PMCID: Pmc4745323.
  10. Costa LG, Tagliaferri S, Roque PJ, Pellacani C. Role of glutamate receptors in tetrabrominated diphenyl ether (BDE-47) neurotoxicity in mouse cerebellar granule neurons. Toxicology letters. 2016;241:159-66. PMID: 26640238;  PMCID: Pmc4691362.
  11. Cui JY, Klaassen CD. RNA-Seq reveals common and unique PXR- and CAR-target gene signatures in the mouse liver transcriptome. Biochimica et biophysica acta. 2016;1859(9):1198-217. PMID: 27113289;  PMCID: Pmc5552365
  12. Fohner AE, Wang Z, Yracheta J, O'Brien DM, Hopkins SE, Black J, Philip J, Wiener HW, Tiwari HK, Stapleton PL, Tsai JM, Thornton TA, Boyer BB, Thummel KE. Genetics, Diet, and Season Are Associated with Serum 25-Hydroxycholecalciferol Concentration in a Yup'ik Study Population from Southwestern Alaska. The Journal of nutrition. 2016;146(2):318-25. PMID: 26661839;  PMCID: Pmc4725435.
  13. Fu ZD, Selwyn FP, Cui JY, Klaassen CD. RNA Sequencing Quantification of Xenobiotic-Processing Genes in Various Sections of the Intestine in Comparison to the Liver of Male Mice. Drug metabolism and disposition: the biological fate of chemicals. 2016;44(6):842-56. PMID: 27048750;  PMCID: Pmc4885488.
  14. Furlong CE, Marsillach J, Jarvik GP, Costa LG. Paraoxonases-1, -2 and -3: What are their functions? Chemico-biological interactions. 2016;259(Pt B):51-62. PMID: 27238723;  PMCID: Pmc5391248.
  15. Garrick JM, Dao K, de Laat R, Elsworth J, Cole TB, Marsillach J, Furlong CE, Costa LG. Developmental expression of paraoxonase 2. Chemico-biological interactions. 2016;259(Pt B):168-74. PMID: 27062895;  PMCID: Pmc5055469.
  16. Harris S, Shubin SP, Wegner S, Van Ness K, Green F, Hong SW, Faustman EM. The presence of macrophages and inflammatory responses in an in vitro testicular co-culture model of male reproductive development enhance relevance to in vivo conditions. Toxicology in vitro : an international journal published in association with BIBRA. 2016;36:210-5. PMID: 27511800;  PMCID: Pmc5026229.
  17. Harris S, Wegner S, Hong SW, Faustman EM. Phthalate metabolism and kinetics in an in vitro model of testis development. Toxicology in vitro : an international journal published in association with BIBRA. 2016;32:123-31. PMID: 26689326;  PMCID: Pmc5193371.
  18. Jusko TA, De Roos AJ, Lee SY, Thevenet-Morrison K, Schwartz SM, Verner MA, Murinova LP, Drobna B, Kocan A, Fabisikova A, Conka K, Trnovec T, Hertz-Picciotto I, Lawrence BP. A Birth Cohort Study of Maternal and Infant Serum PCB-153 and DDE Concentrations and Responses to Infant Tuberculosis Vaccination. Environmental health perspectives. 2016;124(6):813-21. PMID: 26649893;  PMCID: Pmc4892928.
  19. Kaufman JD, Adar SD, Barr RG, Budoff M, Burke GL, Curl CL, Daviglus ML, Diez Roux AV, Gassett AJ, Jacobs DR, Jr., Kronmal R, Larson TV, Navas-Acien A, Olives C, Sampson PD, Sheppard L, Siscovick DS, Stein JH, Szpiro AA, Watson KE. Association between air pollution and coronary artery calcification within six metropolitan areas in the USA (the Multi-Ethnic Study of Atherosclerosis and Air Pollution): a longitudinal cohort study. Lancet (London, England). 2016;388(10045):696-704. PMID: 27233746;  PMCID: Pmc5019949.
  20. Kaufman JD, Spalt EW, Curl CL, Hajat A, Jones MR, Kim SY, Vedal S, Szpiro AA, Gassett A, Sheppard L, Daviglus ML, Adar SD. Advances in Understanding Air Pollution and CVD. Global heart. 2016;11(3):343-52. PMID: 27741981;  PMCID: Pmc5082281.
  21. Kim HY, Wegner SH, Van Ness KP, Park JJ, Pacheco SE, Workman T, Hong S, Griffith W, Faustman EM. Differential epigenetic effects of chlorpyrifos and arsenic in proliferating and differentiating human neural progenitor cells. Reproductive toxicology (Elmsford, NY). 2016;65:212-23. PMID: 27523287;  PMCID: Pmc5067221.
  22. Li CY, Cheng SL, Bammler TK, Cui JY. Editor's Highlight: Neonatal Activation of the Xenobiotic-Sensors PXR and CAR Results in Acute and Persistent Down-regulation of PPARalpha-Signaling in Mouse Liver. Toxicological sciences : an official journal of the Society of Toxicology. 2016;153(2):282-302. PMID: 27413110;  PMCID: Pmc5036618.
  23. Li CY, Renaud HJ, Klaassen CD, Cui JY. Age-Specific Regulation of Drug-Processing Genes in Mouse Liver by Ligands of Xenobiotic-Sensing Transcription Factors. Drug metabolism and disposition: the biological fate of chemicals. 2016;44(7):1038-49. PMID: 26577535;  PMCID: Pmc4931882.
  24. Ligresti G, Nagao RJ, Xue J, Choi YJ, Xu J, Ren S, Aburatani T, Anderson SK, MacDonald JW, Bammler TK, Schwartz SM, Muczynski KA, Duffield JS, Himmelfarb J, Zheng Y. A Novel Three-Dimensional Human Peritubular Microvascular System. Journal of the American Society of Nephrology : JASN. 2016;27(8):2370-81. PMID: 26657868;  PMCID: Pmc4978055.
  25. Lin YS, Kerr SJ, Randolph T, Shireman LM, Senn T, McCune JS. Prediction of Intravenous Busulfan Clearance by Endogenous Plasma Biomarkers Using Global Pharmacometabolomics. Metabolomics : Official journal of the Metabolomic Society. 2016;12(10). PMID: 28827982;  PMCID: Pmc5562150.
  26. Liu R, Young MT, Chen JC, Kaufman JD, Chen H. Ambient Air Pollution Exposures and Risk of Parkinson Disease. Environmental health perspectives. 2016;124(11):1759-65. PMID: 27285422;  PMCID: PMC5089873 
  27. Lundin JI, Dills RL, Ylitalo GM, Hanson MB, Emmons CK, Schorr GS, Ahmad J, Hempelmann JA, Parsons KM, Wasser SK. Persistent Organic Pollutant Determination in Killer Whale Scat Samples: Optimization of a Gas Chromatography/Mass Spectrometry Method and Application to Field Samples. Archives of environmental contamination and toxicology. 2016;70(1):9-19. PMID: 26298464.
  28. Marsillach J, Costa LG, Furlong CE. Paraoxonase-1 and Early-Life Environmental Exposures. Annals of global health. 2016;82(1):100-10. PMID: 27325068;  PMCID: Pmc4916371.
  29. Mohanty AF, Siscovick DS, Williams MA, Thompson ML, Burbacher TM, Enquobahrie DA. Periconceptional seafood intake and pregnancy complications. Public health nutrition. 2016;19(10):1795-803. PMID: 26626702;  PMCID: Pmc5500259.
  30. Oetjens MT, Brown-Gentry K, Goodloe R, Dilks HH, Crawford DC. Population Stratification in the Context of Diverse Epidemiologic Surveys Sans Genome-Wide Data. Frontiers in genetics. 2016;7:76. PMID: 27200085;  PMCID: Pmc4858524.
  31. Park S, Cheng SL, Cui JY. Characterizing drug-metabolizing enzymes and transporters that are bona fide CAR-target genes in mouse intestine. Acta pharmaceutica Sinica B. 2016;6(5):475-91. PMID: 27709017;  PMCID: Pmc5045557.
  32. Riley EA, Gould T, Hartin K, Fruin SA, Simpson CD, Yost MG, Larson T. Ultrafine particle size as a tracer for aircraft turbine emissions. Atmospheric environment (Oxford, England : 1994). 2016;139:20-9. PMID: 27795692;  PMCID: Pmc5082839.
  33. Riley EA, Schaal L, Sasakura M, Crampton R, Gould TR, Hartin K, Sheppard L, Larson T, Simpson CD, Yost MG. Correlations between short-term mobile monitoring and long-term passive sampler measurements of traffic-related air pollution. Atmospheric environment (Oxford, England : 1994). 2016;132:229-39. PMID: 27087779;  PMCID: Pmc4827705.
  34. Romano ME, Enquobahrie DA, Simpson C, Checkoway H, Williams MA. Maternal body burden of cadmium and offspring size at birth. Environmental research. 2016;147:461-8. PMID: 26970900;  PMCID: Pmc4866807.
  35. Roque PJ, Dao K, Costa LG. Microglia mediate diesel exhaust particle-induced cerebellar neuronal toxicity through neuroinflammatory mechanisms. Neurotoxicology. 2016;56:204-14. PMID: 27543421;  PMCID: Pmc5048600.
  36. Ryu RJ, Eyal S, Easterling TR, Caritis SN, Venkataraman R, Hankins G, Rytting E, Thummel K, Kelly EJ, Risler L, Phillips B, Honaker MT, Shen DD, Hebert MF. Pharmacokinetics of metoprolol during pregnancy and lactation. Journal of clinical pharmacology. 2016;56(5):581-9. PMID: 26461463;  PMCID: Pmc5564514.
  37. Sack CS, Goss CH. Nature versus Nurture: Does Genetic Ancestry Alter the Effect of Air Pollution in Children with Asthma? American journal of respiratory and critical care medicine. 2016;193(11):1196-8. PMID: 27248587;  PMCID: Pmc4910905.
  38. Sack CS, Jansen KL, Cosselman KE, Trenga CA, Stapleton PL, Allen J, Peretz A, Olives C, Kaufman JD. Pretreatment with Antioxidants Augments the Acute Arterial Vasoconstriction Caused by Diesel Exhaust Inhalation. American journal of respiratory and critical care medicine. 2016;193(9):1000-7. PMID: 26599707;  PMCID: Pmc4872652.
  39. Sack CS, Kaufman JD. Air Pollution Levels and Children's Lung Health. How Low Do We Need to Go? American journal of respiratory and critical care medicine. 2016;193(8):819-20. PMID: 27082532;  PMCID: Pmc4849184.
  40. Selwyn FP, Cheng SL, Klaassen CD, Cui JY. Regulation of Hepatic Drug-Metabolizing Enzymes in Germ-Free Mice by Conventionalization and Probiotics. Drug metabolism and disposition: the biological fate of chemicals. 2016;44(2):262-74. PMID: 26586378;  PMCID: Pmc4746487.
  41. Shi M, Kovac A, Korff A, Cook TJ, Ginghina C, Bullock KM, Yang L, Stewart T, Zheng D, Aro P, Atik A, Kerr KF, Zabetian CP, Peskind ER, Hu SC, Quinn JF, Galasko DR, Montine TJ, Banks WA, Zhang J. CNS tau efflux via exosomes is likely increased in Parkinson's disease but not in Alzheimer's disease. Alzheimer's & dementia : the journal of the Alzheimer's Association. 2016;12(11):1125-31. PMID: 27234211;  PMCID: Pmc5107127.
  42. Shirasaka Y, Chaudhry AS, McDonald M, Prasad B, Wong T, Calamia JC, Fohner A, Thornton TA, Isoherranen N, Unadkat JD, Rettie AE, Schuetz EG, Thummel KE. Interindividual variability of CYP2C19-catalyzed drug metabolism due to differences in gene diplotypes and cytochrome P450 oxidoreductase content. The pharmacogenomics journal. 2016;16(4):375-87. PMID: 26323597;  PMCID: Pmc4775436.
  43. Spalt EW, Curl CL, Allen RW, Cohen M, Adar SD, Stukovsky KH, Avol E, Castro-Diehl C, Nunn C, Mancera-Cuevas K, Kaufman JD. Time-location patterns of a diverse population of older adults: the Multi-Ethnic Study of Atherosclerosis and Air Pollution (MESA Air). Journal of exposure science & environmental epidemiology. 2016;26(4):349-55. PMID: 25921083;  PMCID: Pmc4641054.
  44. Spalt EW, Curl CL, Allen RW, Cohen M, Williams K, Hirsch JA, Adar SD, Kaufman JD. Factors influencing time-location patterns and their impact on estimates of exposure: the Multi-Ethnic Study of Atherosclerosis and Air Pollution (MESA Air). Journal of exposure science & environmental epidemiology. 2016;26(4):341-8. PMID: 25921081;  PMCID: Pmc4641036.
  45. Tracy TS, Chaudhry AS, Prasad B, Thummel KE, Schuetz EG, Zhong XB, Tien YC, Jeong H, Pan X, Shireman LM, Tay-Sontheimer J, Lin YS. Interindividual Variability in Cytochrome P450-Mediated Drug Metabolism. Drug metabolism and disposition: the biological fate of chemicals. 2016;44(3):343-51. PMID: 26681736;  PMCID: Pmc4767386.
  46. Wang L, Espinoza HM, MacDonald JW, Bammler TK, Williams CR, Yeh A, Louie KW, Marcinek DJ, Gallagher EP. Olfactory Transcriptional Analysis of Salmon Exposed to Mixtures of Chlorpyrifos and Malathion Reveal Novel Molecular Pathways of Neurobehavioral Injury. Toxicological sciences : an official journal of the Society of Toxicology. 2016;149(1):145-57. PMID: 26494550;  PMCID: Pmc4731405.
  47. Weber EJ, Chapron A, Chapron BD, Voellinger JL, Lidberg KA, Yeung CK, Wang Z, Yamaura Y, Hailey DW, Neumann T, Shen DD, Thummel KE, Muczynski KA, Himmelfarb J, Kelly EJ. Development of a microphysiological model of human kidney proximal tubule function. Kidney international. 2016;90(3):627-37. PMID: 27521113;  PMCID: Pmc4987715.
  48. Weldon BA, E MF, Oberdorster G, Workman T, Griffith WC, Kneuer C, Yu IJ. Occupational exposure limit for silver nanoparticles: considerations on the derivation of a general health-based value. Nanotoxicology. 2016;10(7):945-56. PMID: 26982810.
  49. Weldon BA, Shubin SP, Smith MN, Workman T, Artemenko A, Griffith WC, Thompson B, Faustman EM. Urinary microRNAs as potential biomarkers of pesticide exposure. Toxicology and applied pharmacology. 2016;312:19-25. PMID: 26826490;  PMCID: Pmc4963307.
  50. Weuve J, Kaufman JD, Szpiro AA, Curl C, Puett RC, Beck T, Evans DA, Mendes de Leon CF. Exposure to Traffic-Related Air Pollution in Relation to Progression in Physical Disability among Older Adults. Environmental health perspectives. 2016;124(7):1000-8. PMID: 27022889;  PMCID: Pmc4937863.
  51. Williams CR, MacDonald JW, Bammler TK, Paulsen MH, Simpson CD, Gallagher EP. From the Cover: Cadmium Exposure Differentially Alters Odorant-Driven Behaviors and Expression of Olfactory Receptors in Juvenile Coho Salmon (Oncorhynchus kisutch). Toxicological sciences : an official journal of the Society of Toxicology. 2016;154(2):267-77. PMID: 27621283;  PMCID: Pmc5139070.

2015

  1. Hoekstra JG, Cook TJ, Stewart T, Mattison H, Dreisbach MT, Hoffer ZS, Zhang J. Astrocytic dynamin-like protein 1 regulates neuronal protection against excitotoxicity in Parkinson disease. The American journal of pathology. 2015;185(2):536-49. 
  2. Krenz JE, Hofmann JN, Smith TR, Cunningham RN, Fenske RA, Simpson CD, Keifer M. Determinants of butyrylcholinesterase inhibition among agricultural pesticide handlers in Washington State: an update. The Annals of occupational hygiene. 2015;59(1):25-40. 
  3. Mohanty AF, Farin FM, Bammler TK, MacDonald JW, Afsharinejad Z, Burbacher TM, Siscovick DS, Williams MA, Enquobahrie DA. Infant sex-specific placental cadmium and DNA methylation associations. Environmental research. 2015;138c:74-81. 
  4. Park SS, Beyer RP, Smyth MD, Clarke CM, Timms AE, Bammler TK, Stamper BD, Mecham BH, Gustafson JA, Cunningham ML. Osteoblast differentiation profiles define sex specific gene expression patterns in craniosynostosis. Bone. 2015.
  5. Peterson TC, Hoane MR, McConomy KS, Farin FM, Bammler TK, MacDonald JW, Kantor ED, Anderson GD. A Combination Therapy of Nicotinamide and Progesterone Improves Functional Recovery Following Traumatic Brain Injury. Journal of neurotrauma. 2015.
  6. Searles Nielsen S, Checkoway H, Zhang J, Hofmann JN, Keifer MC, Paulsen M, Farin FM, Cook TJ, Simpson CD. Blood alpha-synuclein in agricultural pesticide handlers in central Washington State. Environmental research. 2015;136:75-81.
  7. Searles Nielsen S, Checkoway H, Criswell SR, Farin FM, Stapleton PL, Sheppard L, Racette BA. Inducible nitric oxide synthase gene methylation and parkinsonism in manganese-exposed welders. Parkinsonism & related disorders. 2015;21(4):355-60.
  8. Shi M, Movius J, Dator R, Aro P, Zhao Y, Pan C, Lin X, Bammler TK, Stewart T, Zabetian CP, Peskind ER, Hu SC, Quinn JF, Galasko DR, Zhang J. Cerebrospinal fluid peptides as potential Parkinson disease biomarkers: a staged pipeline for discovery and validation. Molecular & cellular proteomics : MCP. 2015;14(3):544-55.

2014

  1. Ahmed I, Lee PC, Lill CM, Searles Nielsen S, Artaud F, Gallagher LG, Loriot MA, Mulot C, Nacfer M, Liu T, Biernacka JM, Armasu S, Anderson K, Farin FM, Lassen CF, Hansen J, Olsen JH, Bertram L, Maraganore DM, Checkoway H, Ritz B, Elbaz A. Lack of replication of the GRIN2A-by-coffee interaction in Parkinson disease. PLoS genetics. 2014;10(11):e1004788. 
  2. Ahn EH, Kim Y, Kshitiz, An SS, Afzal J, Lee S, Kwak M, Suh KY, Kim DH, Levchenko A. Spatial control of adult stem cell fate using nanotopographic cues. Biomaterials. 2014;35(8):2401-10. 
  3. Amory, J. K., S. Hong, X. Yu, C. H. Muller, E. Faustman and A. Goldstein. Melphalan, alone or conjugated to an FSH-beta peptide, kills murine testicular cells in vitro and transiently suppresses murine spermatogenesis in vivo. Theriogenology  2014 Jul 1;82(1):152-9. 
  4. Cole, T. B., W. F. Li, A. L. Co, A. M. Hay, J. W. MacDonald, T. K. Bammler, F. M. Farin, L. G. Costa and C. E. Furlong. Repeated gestational exposure of mice to chlorpyrifos oxon is associated with paraoxonase 1 (PON1) modulated effects in maternal and fetal tissues.Toxicol Sci 2014 Oct;141(2):409-22. 
  5. Costa, L. G., T. B. Cole, J. Coburn, Y. C. Chang, K. Dao and P. Roque. Neurotoxicants are in the air: convergence of human, animal, and in vitro studies on the effects of air pollution on the brain. Biomed Res Int 2014;2014:736385. 
  6. Costa, L. G., R. de Laat, K. Dao, C. Pellacani, T. B. Cole and C. E. Furlong (2014). Paraoxonase-2 (PON2) in brain and its potential role in neuroprotection. Neurotoxicology 2014 Jul;43:3-9. 
  7. Costa LG, de Laat R, Tagliaferri S, Pellacani C. A mechanistic view of polybrominated diphenyl ether (PBDE) developmental neurotoxicity. Toxicology letters. 2014;230(2):282-94. 
  8. Dai DF, Karunadharma PP, Chiao YA, Basisty N, Crispin D, Hsieh EJ, Chen T, Gu H, Djukovic D, Raftery D, Beyer RP, MacCoss MJ, Rabinovitch PS. Altered proteome turnover and remodeling by short-term caloric restriction or rapamycin rejuvenate the aging heart. Aging cell. 2014;13(3):529-39.
  9. Hiolski EM, Kendrick PS, Frame ER, Myers MS, Bammler TK, Beyer RP, Farin FM, Wilkerson HW, Smith DR, Marcinek DJ, Lefebvre KA. Chronic low-level domoic acid exposure alters gene transcription and impairs mitochondrial function in the CNS. Aquatic toxicology (Amsterdam, Netherlands). 2014;155:151-9. 
  10. Kemp CJ, Moore JM, Moser R, Bernard B, Teater M, Smith LE, Rabaia NA, Gurley KE, Guinney J, Busch SE, Shaknovich R, Lobanenkov VV, Liggitt D, Shmulevich I, Melnick A, Filippova GN. CTCF haploinsufficiency destabilizes DNA methylation and predisposes to cancer. Cell reports. 2014;7(4):1020-9.
  11. Mohar I, Stamper BD, Rademacher PM, White CC, Nelson SD, Kavanagh TJ. Acetaminophen-induced liver damage in mice is associated with gender-specific adduction of peroxiredoxin-6. Redox biology. 2014;2:377-87. 
  12. Nielsen S, Checkoway H, Criswell S, Farin F, Racette B. 0239 Inducible nitric oxide synthase gene methylation and parkinsonism in manganese-exposed welders0239 Inducible nitric oxide synthase gene methylation and parkinsonism in manganese-exposed welders. Occupational and environmental medicine. 2014;71 Suppl 1:A32.
  13. Nguyen GH, Tang W, Robles AI, Beyer RP, Gray LT, Welsh JA, Schetter , AJ, Kumamoto K, Wang XW, Hickson ID, Maizels N, Monnat RJ, Jr., Harris CC. Regulation of gene expression by the BLM helicase correlates with the presence of G-quadruplex DNA motifs. Proceedings of the National Academy of Sciences of the United States of America. 2014;111(27):9905-10.
  14. Pan C, Zhou Y, Dator R, Ginghina C, Zhao Y, Movius J, Peskind E, Zabetian CP, Quinn J, Galasko D, Stewart T, Shi M, Zhang J. Targeted discovery and validation of plasma biomarkers of Parkinson's disease. Journal of proteome research. 2014;13(11):4535-45.
  15. Penning TM, Breysse PN, Gray K, Howarth M, Yan B. Environmental health research recommendations from the Inter-Environmental Health Sciences Core Center Working Group on unconventional natural gas drilling operations. Environ Health Perspect. 2014 Nov;122(11):1155-9. 
  16. Pizzurro, D. M., K. Dao and L. G. Costa. Astrocytes protect against diazinon- and diazoxon-induced inhibition of neurite outgrowth by regulating neuronal glutathione. Toxicology 2014 Apr 6;318:59-68. 
  17. Pizzurro, D. M., K. Dao and L. G. Costa. Diazinon and diazoxon impair the ability of astrocytes to foster neurite outgrowth in primary hippocampal neurons. Toxicol Appl Pharmacol 2014 Feb 1;274(3):372-82. 
  18. Riley EA, Banks L, Fintzi J, Gould TR, Hartin K, Schaal L, Davey M, Sheppard L, Larson T, Yost MG, Simpson CD. Multi-pollutant mobile platform measurements of air pollutants adjacent to a major roadway. Atmospheric environment (Oxford, England : 1994). 2014;98:492-9. 
  19. Roque PJ, Guizzetti M, Costa LG. Synaptic structure quantification in cultured neurons. Current protocols in toxicology / editorial board, Mahin D Maines (editor-in-chief)  [et al]. 2014;60:12.22.1-12.22.32.
  20. Roth JA, Boudreau D, Fujii MM, Farin FM, Rettie AE, Thummel KE, Veenstra DL. Genetic risk factors for major bleeding in patients treated with warfarin in a community setting. Clinical pharmacology and therapeutics. 2014;95(6):636-43.
  21. Schaupp CM, White CC, Merrill GF, Kavanagh TJ. Metabolism of doxorubicin to the cardiotoxic metabolite doxorubicinol is increased in a mouse model of chronic glutathione deficiency: A potential role for carbonyl reductase 3. Chemico-biological interactions. 2014.
  22. Shi M, Liu C, Cook TJ, Bullock KM, Zhao Y, Ginghina C, Li Y, Aro P, Dator R, He C, Hipp MJ, Zabetian CP, Peskind ER, Hu SC, Quinn JF, Galasko DR, Banks WA, Zhang J. Plasma exosomal alpha-synuclein is likely CNS-derived and increased in Parkinson's disease. Acta neuropathologica. 2014;128(5):639-50. 
  23. Stewart T, Liu C, Ginghina C, Cain KC, Auinger P, Cholerton B, Shi M, Zhang J. Cerebrospinal fluid alpha-synuclein predicts cognitive decline in Parkinson disease progression in the DATATOP cohort. The American journal of pathology. 2014;184(4):966-75. 
  24. Stewart, T., Y. T. Sui, L. F. Gonzalez-Cuyar, D. T. Wong, D. M. Akin, V. Tumas, J. Aasly, E. Ashmore, P. Aro, C. Ginghina, A. Korff, C. P. Zabetian, J. B. Leverenz, M. Shi and J. Zhang (2014). Cheek cell-derived alpha-synuclein and DJ-1 do not differentiate Parkinson's disease from control. Neurobiol Aging 2014 Feb;35(2):418-20. 
  25. Tay-Sontheimer J, Shireman LM, Beyer RP, Senn T, Witten D, Pearce RE, Gaedigk A, Gana Fomban CL, Lutz JD, Isoherranen N, Thummel KE, Fiehn O, Leeder JS, Lin YS. Detection of an endogenous urinary biomarker associated with CYP2D6 activity using global metabolomics. Pharmacogenomics. 2014;15(16):1947-62.
  26. Vonder Haar C, Anderson GD, Elmore BE, Moore LH, Wright AM, Kantor ED, Farin FM, Bammler TK, MacDonald JW, Hoane MR. Comparison of the effect of minocycline and simvastatin on functional recovery and gene expression in a rat traumatic brain injury model. Journal of neurotrauma. 2014;31(10):961-75.
  27. Wan JY, Edwards KL, Hutter CM, Mata IF, Samii A, Roberts JW, Agarwal P, Checkoway H, Farin FM, Yearout D, Zabetian CP. Association mapping of the PARK10 region for Parkinson's disease susceptibility genes. Parkinsonism & related disorders. 2014;20(1):93-8.
  28. Wegner SH, Yu X, Pacheco Shubin S, Griffith WC, Faustman EM. Stage-specific signaling pathways during murine testis development and spermatogenesis: A pathwaybased analysis to quantify developmental dynamics. Reprod Toxicol. 2014 Nov 25;51C:31-39. 
  29. Weldy, C. S., Y. Liu, H. D. Liggitt and M. T. Chin (2014). In utero exposure to diesel exhaust air pollution promotes adverse intrauterine conditions, resulting in weight gain, altered blood pressure, and increased susceptibility to heart failure in adult mice. PLoS One 2014 Feb 12;9(2):e88582. 
  30. Woods, J. S., N. J. Heyer, J. E. Russo, M. D. Martin and F. M. Farin (2014). Genetic polymorphisms affecting susceptibility to mercury neurotoxicity in children: summary findings from the Casa Pia Children's Amalgam clinical trial. Neurotoxicology 2014 Sep;44:288-302. 
  31. Woods, J. S., N. J. Heyer, J. E. Russo, M. D. Martin, P. B. Pillai, T. K. Bammler and F. M. Farin (2014). Genetic polymorphisms of catechol-Omethyltransferase modify the neurobehavioral effects of mercury in children. J Toxicol Environ Health 2014;77(6):293-312. 
  32. Wright JH, Johnson MM, Shimizu-Albergine M, Bauer RL, HaX BJ, Surapisitchat J, Hudkins KL, Riehle KJ, Johnson SC, Yeh MM, Bammler TK, Beyer RP, Gilbertson DG, Alpers CE, Fausto N, Campbell JS. Paracrine activation of hepatic stellate cells in platelet-derived growth factor C transgenic mice: Evidence for stromal induction of hepatocellular carcinoma. International journal of cancer Journal international du cancer. 2014;134(4):778-88. 

2013

  1. Adar SD, Sheppard L, Vedal S, Polak JF, Sampson PD, Diez Roux AV, Budoff M, Jacobs DR, Jr., Barr RG, Watson K, Kaufman JD. Fine particulate air pollution and the progression of carotid intima-medial thickness: a prospective cohort study from the multi-ethnic study of atherosclerosis and air pollution. PLoS medicine. 2013;10(4):e1001430. 
  2. Anderson GD, Peterson TC, Farin FM, Bammler TK, Beyer RP, Kantor ED, Hoane MR. The effect of nicotinamide on gene expression in a traumatic brain injury model. Frontiers in neuroscience. 2013;7:21.
  3. Anderson GD, Peterson TC, Vonder Haar C, Kantor ED, Farin FM, Bammler TK, Macdonald JW, Hoane MR. Comparison of the effects of erythropoietin and anakinra on functional recovery and gene expression in a traumatic brain injury model. Frontiers in pharmacology. 2013;4:129.
  4. Baker PE, Cole TB, Cartwright M, Suzuki SM, Thummel KE, Lin YS, Co AL, Rettie AE, Kim JH, Furlong CE. Identifying safer anti-wear triaryl phosphate additives for jet engine lubricants. Chemico-biological interactions. 2013;203(1):257-64. 
  5. Barrington-Trimis JL, Searles Nielsen S, Preston-Martin S, Gauderman WJ, Holly EA, Farin FM, Mueller BA, McKean-Cowdin R. Parental smoking and risk of childhood brain tumors by functional polymorphisms in polycyclic aromatic hydrocarbon metabolism genes. PloS one. 2013;8(11):e79110. 
  6. Bonner JC, Silva RM, Taylor AJ, Brown JM, Hilderbrand SC, Castranova V, Porter D, Elder A, Oberdorster G, Harkema JR, Bramble LA, Kavanagh TJ, Botta D, Nel A, Pinkerton KE. Interlaboratory evaluation of rodent pulmonary responses to engineered nanomaterials: the NIEHS Nano GO Consortium. Environmental health perspectives. 2013;121(6):676-82. 
  7. Carlsten C, Oron AP, Curtiss H, Jarvis S, Daniell W, Kaufman JD. Symptoms in response to controlled diesel exhaust more closely reflect exposure perception than true exposure. PloS one. 2013;8(12):e83573. 
  8. Costa LG, Giordano G, Cole TB, Marsillach J, Furlong CE. Paraoxonase 1 (PON1) as a genetic determinant of susceptibility to organophosphate toxicity. Toxicology. 2013;307:115-22. 
  9. Costa LG, Tait L, de Laat R, Dao K, Giordano G, Pellacani C, Cole TB, Furlong CE. Modulation of paraoxonase 2 (PON2) in mouse brain by the polyphenol quercetin: a mechanism of neuroprotection? Neurochemical research. 2013;38(9):1809-18. 
  10. Curl CL, Beresford SA, Hajat A, Kaufman JD, Moore K, Nettleton JA, Diez-Roux AV. Associations of organic produce consumption with socioeconomic status and the local food environment: Multi-Ethnic Study of Atherosclerosis (MESA). PloS one. 2013;8(7):e69778. 
  11. D'Ambrosio R, Eastman CL, Darvas F, Fender JS, Verley DR, Farin FM, Wilkerson HW, Temkin NR, Miller JW, Ojemann J, Rothman SM, Smyth MD. Mild passive focal cooling prevents epileptic seizures after head injury in rats. Annals of neurology. 2013;73(2):199-209. 
  12. Giordano G, Kavanagh TJ, Faustman EM, White CC, Costa LG. Low-level domoic acid protects mouse cerebellar granule neurons from acute neurotoxicity: role of glutathione. Toxicological sciences : an official journal of the Society of Toxicology. 2013;132(2):399-408. 
  13. Giordano G, Tait L, Furlong CE, Cole TB, Kavanagh TJ, Costa LG. Gender differences in brain susceptibility to oxidative stress are mediated by levels of paraoxonase-2 expression. Free radical biology & medicine. 2013;58:98-108. 
  14. Goh J, Tsai J, Bammler TK, Farin FM, Endicott E, Ladiges WC. Exercise training in transgenic mice is associated with attenuation of early breast cancer growth in a dose-dependent manner. PloS one. 2013;8(11):e80123.
  15. Hajat A, Diez-Roux AV, Adar SD, Auchincloss AH, Lovasi GS, O'Neill MS, Sheppard L, Kaufman JD. Air pollution and individual and neighborhood socioeconomic status: evidence from the Multi-Ethnic Study of Atherosclerosis (MESA). Environmental health perspectives. 2013;121(11-12):1325-33. 
  16. Hussain SK, Madeleine MM, Johnson LG, Du Q, Galloway DA, Daling JR, Malkki M, Petersdorf EW, Schwartz SM. Nucleotide variation in IL-10 and IL-12 and their receptors and cervical and vulvar cancer risk: a hybrid case-parent triad and case-control study. International journal of cancer Journal international du cancer. 2013;133(1):201-13. 
  17. Kelly E, Wang Z, Voellinger J, Yeung C, Shen D, Thummel K, Zheng Y, Ligresti G, Eaton D, Muczynski K, Duffield J, Neumann T, Tourovskaia A, Fauver M, Kramer G, Asp E, Himmelfarb J. Innovations in preclinical biology: ex vivo engineering of a human kidney tissue microperfusion system. Stem Cell Research & Therapy. 2013;4(Suppl 1):S17. 
  18.  Khojasteh SC, Hartley DP, Ford KA, Uppal H, Oishi S, Nelson SD. Characterization of rat liver proteins adducted by reactive metabolites of menthofuran. Chemical research in toxicology. 2012;25(11):2301-9. 
  19.  Kim ES, Ahn EH, Chung E, Kim DH. Recent advances in nanobiotechnology and high-throughput molecular techniques for systems biomedicine. Molecules and cells. 2013;36(6):477-84. 
  20.  Korff A, Liu C, Ginghina C, Shi M, Zhang J. alpha-Synuclein in cerebrospinal fluid of Alzheimer's disease and mild cognitive impairment. Journal of Alzheimer's disease : JAD. 2013;36(4):679-88. 
  21. Krishnan RM, Sullivan JH, Carlsten C, Wilkerson HW, Beyer RP, Bammler T, Farin F, Peretz A, Kaufman JD. A randomized cross-over study of inhalation of diesel exhaust, hematological indices, and endothelial markers in humans. Particle and fibre toxicology. 2013;10:7. 
  22.  Lim J, Lawson GW, Nakamura BN, Ortiz L, Hur JA, Kavanagh TJ, Luderer U. Glutathione-deficient mice have increased sensitivity to transplacental benzo[a]pyrene-induced premature ovarian failure and ovarian tumorigenesis. Cancer research. 2013;73(2):908-17.
  23.  Marsillach J, Costa LG, Furlong CE. Protein adducts as biomarkers of exposure to organophosphorus compounds. Toxicology. 2013;307:46-54. 
  24.  Marsillach J, Hsieh EJ, Richter RJ, MacCoss MJ, Furlong CE. Proteomic analysis of adducted butyrylcholinesterase for biomonitoring organophosphorus exposures. Chemico-biological interactions. 2013;203(1):85-90. 
  25.  Mattes TE, Nunn BL, Marshall KT, Proskurowski G, Kelley DS, Kawka OE, Goodlett DR, Hansell DA, Morris RM. Sulfur oxidizers dominate carbon fixation at a biogeochemical hot spot in the dark ocean. The ISME journal. 2013;7(12):2349-60. 
  26.  Mattison HA, Nie H, Gao H, Zhou H, Hong JS, Zhang J. Suppressed pro-inflammatory response of microglia in CX3CR1 knockout mice. Journal of neuroimmunology. 2013;257(1-2):110-5. 
  27.  Mattsson N, Insel P, Tosun D, Zhang J, Jack CR, Jr., Galasko D, Weiner M. Effects of baseline CSF alpha-synuclein on regional brain atrophy rates in healthy elders, mild cognitive impairment and Alzheimer's disease. PloS one. 2013;8(12):e85443. 
  28.  McConnachie LA, Botta D, White CC, Weldy CS, Wilkerson HW, Yu J, Dills R, Yu X, Griffith WC, Faustman EM, Farin FM, Gill SE, Parks WC, Hu X, Gao X, Eaton DL, Kavanagh TJ. The glutathione synthesis gene Gclm modulates amphiphilic polymer-coated CdSe/ZnS quantum dot-induced lung inflammation in mice. PloS one. 2013;8(5):e64165. 
  29.  McConnachie LA, White CC, Botta D, Zadworny ME, Cox DP, Beyer RP, Hu X, Eaton DL, Gao X, Kavanagh TJ. Heme oxygenase expression as a biomarker of exposure to amphiphilic polymer-coated CdSe/ZnS quantum dots. Nanotoxicology. 2013;7(2):181-91. 
  30.  Nunn, B. L., J. F. Faux, A. A. Hippmann, M. T. Maldonado, H. R. Harvey, D. R. Goodlett, P. W. Boyd and R. F. Strzepek (2013). Diatom proteomics reveals unique acclimation strategies to mitigate Fe limitation. PLoS One 8(10): e75653.
  31.  Parkinson OT, Liggitt HD, Rettie AE, Kelly EJ. Generation and characterization of a Cyp4b1 null mouse and the role of CYP4B1 in the activation and toxicity of Ipomeanol. Toxicological sciences : an official journal of the Society of Toxicology. 2013;134(2):243-50. 
  32.  Poulton EJ, Levy L, Lampe JW, Shen DD, Tracy J, Shuhart MC, Thummel KE, Eaton DL. Sulforaphane is not an effective antagonist of the human pregnane X-receptor in vivo. Toxicology and applied pharmacology. 2013;266(1):122-31. 
  33.  Riehle KJ, Haque J, McMahan RS, Kavanagh TJ, Fausto N, Campbell JS. Sustained Glutathione Deficiency Interferes with the Liver Response to TNF-alpha and Liver Regeneration after Partial Hepatectomy in Mice. Journal of liver: disease & transplantation. 2013;1(2). 
  34.  Sathyanarayana S, Alcedo G, Saelens BE, Zhou C, Dills RL, Yu J, Lanphear B. Unexpected results in a randomized dietary trial to reduce phthalate and bisphenol A exposures. Journal of exposure science & environmental epidemiology. 2013;23(4):378-84. 
  35.  Searles Nielsen S, Bammler TK, Gallagher LG, Farin FM, Longstreth W, Jr., Franklin GM, Swanson PD, Checkoway H. Genotype and age at Parkinson disease diagnosis. International journal of molecular epidemiology and genetics. 2013;4(1):61-9.
  36.  Shuster DL, Bammler TK, Beyer RP, Macdonald JW, Tsai JM, Farin FM, Hebert MF, Thummel KE, Mao Q. Gestational age-dependent changes in gene expression of metabolic enzymes and transporters in pregnant mice. Drug metabolism and disposition: the biological fate of chemicals. 2013;41(2):332-42. 
  37.  Siegel MP, Kruse SE, Percival JM, Goh J, White CC, Hopkins HC, Kavanagh TJ, Szeto HH, Rabinovitch PS, Marcinek DJ. Mitochondrial-targeted peptide rapidly improves mitochondrial energetics and skeletal muscle performance in aged mice. Aging cell. 2013;12(5):763-71. 
  38.  Smith WE, Brownell J, White CC, Afsharinejad Z, Tsai J, Hu X, Polyak SJ, Gao X, Kavanagh TJ, Eaton DL. In vitro toxicity assessment of amphiphillic polymer-coated CdSe/ZnS quantum dots in two human liver cell models. ACS nano. 2012;6(11):9475-84. 
  39.  Sun, M., J. D. Kaufman, S. Y. Kim, T. V. Larson, T. R. Gould, J. F. Polak, M. J. Budoff, A. V. Diez Roux and S. Vedal (2013). Particulate matter components and subclinical atherosclerosis: common approaches to estimating exposure in a Multi-Ethnic Study of Atherosclerosis cross-sectional study. Environ Health 2013 May 3;12:39. 
  40.  Toledo JB, Korff A, Shaw LM, Trojanowski JQ, Zhang J. CSF alpha-synuclein improves diagnostic and prognostic performance of CSF tau and Abeta in Alzheimer's disease. Acta neuropathologica. 2013;126(5):683-97
  41.  Wang L, Bammler TK, Beyer RP, Gallagher EP. Copper-induced deregulation of microRNA expression in the zebrafish olfactory system. Environmental science & technology. 2013;47(13):7466-74. 
  42.  Wang J, Hoekstra JG, Zuo C, Cook TJ, Zhang J. Biomarkers of Parkinson's disease: current status and future perspectives. Drug discovery today. 2013;18(3-4):155-62. 
  43. Wang Z, Lin YS, Dickmann LJ, Poulton EJ, Eaton DL, Lampe JW, Shen DD, Davis CL, Shuhart MC, Thummel KE. Enhancement of hepatic 4-hydroxylation of 25-hydroxyvitamin D3 through CYP3A4 induction in vitro and in vivo: implications for drug-induced osteomalacia. Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research. 2013;28(5):1101-16. 
  44.  Wang Z, Schuetz EG, Xu Y, Thummel KE. Interplay between vitamin D and the drug metabolizing enzyme CYP3A4. The Journal of steroid biochemistry and molecular biology. 2013;136:54-8. 
  45.  Weldy CS, Liu Y, Chang YC, Medvedev IO, Fox JR, Larson TV, Chien WM, Chin MT. In utero and early life exposure to diesel exhaust air pollution increases adult susceptibility to heart failure in mice. Particle and fibre toxicology. 2013;10(1):59. 
  46.  Weldy, C. S., I. P. Luttrell, C. C. White, V. Morgan-Stevenson, D. P. Cox, C. M. Carosino, T. V. Larson, J. A. Stewart, J. D. Kaufman, F. Kim, K. Chitaley and T. J. Kavanagh. Glutathione (GSH) and the GSH synthesis gene Gclm modulate plasma redox and vascular responses to acute diesel exhaust inhalation in mice. Inhal Toxicol 25(8): 444-454. 
  47.  Williams LN, Herr AJ, Preston BD. Emergence of DNA polymerase epsilon antimutators that escape error-induced extinction in yeast. Genetics. 2013;193(3):751-70. Epub 2013/01/12. 
  48.  Woods, J. S., N. J. Heyer, J. E. Russo, M. D. Martin, P. B. Pillai and F. M. Farin (2013). Modification of neurobehavioral effects of mercury by genetic polymorphisms of metallothionein in children. Neurotoxicol Teratol 39: 36-44. 2013 Sep-Oct;39:36-44. 
  49.  Zhang J, Mattison HA, Liu C, Ginghina C, Auinger P, McDermott MP, Stewart T, Kang UJ, Cain KC, Shi M. Longitudinal assessment of tau and amyloid beta in cerebrospinal fluid of Parkinson disease. Acta neuropathologica. 2013;126(5):671-82. 
  50.  Zheng S, Tasnif Y, Hebert MF, Davis CL, Shitara Y, Calamia JC, Lin YS, Shen DD, Thummel KE. CYP3A5 gene variation influences cyclosporine A metabolite formation and renal cyclosporine disposition. Transplantation. 2013;95(6):821-7. 

2012

  1. Aasly JO, Shi M, Sossi V, Stewart T, Johansen KK, Wszolek ZK, Zhang J, et al. Cerebrospinal fluid amyloid beta and tau in LRRK2 mutation carriers. Neurology. 2012;78(1):55-61. 
  2. Chiu D, Zhou W, Kitayaporn S, Schwartz DT, Murali-Krishna K, Kavanagh TJ, et al. Biomineralization and size control of stable calcium phosphate core-protein shell nanoparticles: potential for vaccine applications. Bioconjugate chemistry. 2012;23(3):610-7. 
  3. Cole TB, Fisher JC, Burbacher TM, Costa LG, Furlong CE. Neurobehavioral assessment of mice following repeated postnatal exposure to chlorpyrifos-oxon. Neurotoxicology and teratology. 2012;34(3):311-22. 
  4. Cosselman KE, Krishnan RM, Oron AP, Jansen K, Peretz A, Sullivan JH, et al. Blood pressure response to controlled diesel exhaust exposure in human subjects. Hypertension. 2012;59(5):943-8. 
  5. Cunningham RN, Simpson CD, Keifer MC. Hazards faced by informal recyclers in the squatter communities of Asuncion, Paraguay. International journal of occupational and environmental health. 2012;18(3):181-7. 
  6. Dai DF, Hsieh EJ, Liu Y, Chen T, Beyer RP, Chin MT, MacCoss MJ, Rabinovitch PS. Mitochondrial proteome remodelling in pressure overload-induced heart failure: the role of mitochondrial oxidative stress. Cardiovascular research. 2012;93(1):79-88.
  7.  Doronin K, Flatt JW, Di Paolo NC, Khare R, Kalyuzhniy O, Acchione M, MacDonald JW, Bammler TK, Beyer RP, Farin FM, et al. Coagulation factor X activates innate immunity to human species C adenovirus. Science. 2012;338(6108):795-8. 
  8. Gross-Steinmeyer K, Eaton DL. Dietary modulation of the biotransformation and genotoxicity of aflatoxin B(1). Toxicology. 2012;299(2-3):69-79.
  9. Hansen E, Kerr KF. A Comparison of Two Classes of Methods for Estimating False Discovery Rates in Microarray Studies. Scientifica. 2012;2012:9. 
  10.  Heyer NJ, Echeverria D, Woods JS. Disordered porphyrin metabolism: a potential biological marker for autism risk assessment. Autism research : official journal of the International Society for Autism Research. 2012;5(2):84-92. 
  11.  Jimenez N, Anderson GD, Shen DD, Nielsen SS, Farin FM, Seidel K, Lynn AM. Is ethnicity associated with morphine's side effects in children? Morphine pharmacokinetics, analgesic response, and side effects in children having tonsillectomy. Paediatr Anaesth. 2012 Apr 4. 
  12.  Kerr KF. Optimality criteria for the design of 2-color microarray studies. Statistical applications in genetics and molecular biology. 2012;11(1):Article 10. 
  13.  Khojasteh SC, Hartley DP, Ford KA, Uppal H, Oishi S, Nelson SD. Characterization of rat liver proteins adducted by reactive metabolites of menthofuran. Chemical research in toxicology. 2012;25(11):2301-9.
  14. Lefebvre KA, Frame ER, Gulland F, Hansen JD, Kendrick PS, Beyer RP, et al. A novel antibody-based biomarker for chronic algal toxin exposure and sub-acute neurotoxicity. PloS one. 2012;7(5):e36213. 
  15.  Lin, X., T. J. Cook, C. P. Zabetian, J. B. Leverenz, E. R. Peskind, S. C. Hu, K. C. Cain, C. Pan, J. S. Edgar, D. R. Goodlett, B. A. Racette, H. Checkoway, T. J. Montine, M. Shi and J. Zhang (2012). DJ-1 isoforms in whole blood as potential biomarkers of Parkinson disease. Sci Rep 2012;2:954. 
  16.  Lucas G, Lluis-Ganella C, Subirana I, Musameh MD, Gonzalez JR, Nelson CP, Schwartz SM, et al. Hypothesis-based analysis of gene-gene interactions and risk of myocardial infarction. PloS one. 2012;7(8):e41730. 
  17.  Mata IF, Checkoway H, Hutter CM, Samii A, Roberts JW, Kim HM, Agarwal P, Alvarez V, Ribacoba R, Pastor P, Lorenzo-Betancor O, Infante J, Sierra M, Gómez-Garre P, Mir P, Ritz B, Rhodes SL, Colcher A, Van Deerlin V, Chung KA, Quinn JF, Yearout D, Martinez E, Farin FM, Wan JY, Edwards KL, Zabetian CP. Common variation in the LRRK2 gene is a risk factor for Parkinson's disease. Mov  Disord. 2012 Oct 31. 
  18.  Mollenhauer B, Zhang J. Biochemical premotor biomarkers for Parkinson's disease. Movement disorders : official journal of the Movement Disorder Society. 2012;27(5):644-50. 
  19. Nakamura BN, Mohar I, Lawson GW, Cortes MM, Hoang YD, Ortiz L, Kavanagh TJ, et al. Increased sensitivity to testicular toxicity of transplacental benzo[a]pyrene exposure in male glutamate cysteine ligase modifier subunit knockout (Gclm-/-) mice. Toxicological sciences : an official journal of the Society of Toxicology. 2012;126(1):227-41. 
  20.  Sathyanarayana S, Swan SH, Farin FM, Wilkerson HW, Bamshad M, Grady R, et al. A pilot study of the association between genetic polymorphisms involved in estrogen signaling and infant male genital phenotypes. Asian journal of andrology. 2012;14(5):766-72. 
  21.  Searles Nielsen S, Checkoway H, Butler RA, Nelson HH, Farin FM, Longstreth WT, Jr., Franklin GM, Swanson PD, Kelsey KT. LINE-1 DNA methylation, smoking and risk of Parkinson's disease. Journal of Parkinson's disease. 2012;2(4):303-8.
  22. Smith WE, Brownell J, White CC, Afsharinejad Z, Tsai J, Hu X, Polyak SJ, Gao X, Kavanagh TJ, Eaton DL. In vitro toxicity assessment of amphiphillic polymer-coated CdSe/ZnS quantum dots in two human liver cell models. ACS nano. 2012;6(11):9475-84. 
  23.  Stamper BD, Mecham B, Park SS, Wilkerson H, Farin FM, Beyer RP, Bammler TK, Mangravite LM, Cunningham ML. Transcriptome correlation analysis identifies two unique craniosynostosis subtypes associated with IRS1 activation. Physiological genomics. 2012;44(23):1154-63. 
  24.  Stamper BD, Park SS, Beyer RP, Bammler TK, Cunningham ML. Unique sex-based approach identifies transcriptomic biomarkers associated with non-syndromic craniosynostosis. Gene Regul Syst Bio. 2012;6:81-92. 
  25.  Thompson CK, Meitzen J, Replogle K, Drnevich J, Lent KL, Wissman AM, Bammler TK, Beyer RP, Farin FM, et al. Seasonal changes in patterns of gene expression in avian song control brain regions. PloS one. 2012;7(4):e35119. 
  26.  Wang Y, Shi M, Chung KA, Zabetian CP, Leverenz JB, Berg D, Zhang J, et al. Phosphorylated alpha-synuclein in Parkinson's disease. Science translational medicine. 2012;4(121):121ra20. 
  27.  Wang Z, Lin YS, Zheng XE, Senn T, Hashizume T, Scian M, Thummel KE, et al. An inducible cytochrome P450 3A4-dependent vitamin D catabolic pathway. Molecular pharmacology. 2012;81(4):498-509. 
  28.  Weldy CS, Luttrell IP, White CC, Morgan-Stevenson V, Bammler TK, Beyer RP, et al. Glutathione (GSH) and the GSH synthesis gene Gclm modulate vascular reactivity in mice. Free radical biology & medicine. 2012;53(6):1264-78. 
  29. Woods JS, Heyer NJ, Echeverria D, Russo JE, Martin MD, Bernardo MF, et al. Modification of neurobehavioral effects of mercury by a genetic polymorphism of coproporphyrinogen oxidase in children. Neurotoxicology and teratology. 2012;34(5):513-21. 
  30. Zheng XE, Wang Z, Liao MZ, Lin YS, Shuhart MC, Schuetz EG, et al. Human PXR-mediated induction of intestinal CYP3A4 attenuates 1alpha,25-dihydroxyvitamin D(3) function in human colon adenocarcinoma LS180 cells. Biochemical pharmacology. 2012;84(3):391-401. 
  31. Zheng S, Tasnif Y, Hebert MF, Davis CL, Shitara Y, Calamia JC, Lin YS, Shen DD, Thummel KE. Measurement and compartmental modeling of the effect of CYP3A5 gene variation on systemic and intrarenal tacrolimus disposition. Clinical pharmacology and therapeutics. 2012;92(6):737-45. 

2011

  1. Anderson GD, Farin FM, Bammer TK, Beyer RP, Swan AA, Wilkerson HW, Kantor ED, Hoane MR. The effect of progesterone dose on gene expression after traumatic brain injury. J Neurotrauma. 2011 Sep;28(9):1827-43. 
  2. Bai, N., T. Kido, H. Suzuki, G. Yang, T. J. Kavanagh, J. D. Kaufman, M. E. Rosenfeld, C. van Breemen and S. F. Eeden (2011). Changes in atherosclerotic plaques induced by inhalation of diesel exhaust. Atherosclerosis 2011 Jun;216 (2):299-306. 
  3. Callegari A, Liu Y, White CC, Chait A, Gough P, Raines EW, Cox D, Kavanagh TJ, Rosenfeld ME. Gain and loss of function for glutathione synthesis: impact on advanced atherosclerosis in apolipoprotein E-deficient mice. Arterioscler ThrombVasc Biol. 2011 Nov;31(11):2473-82.
  4. Choi WS, Palmiter RD, Xia Z. Loss of mitochondrial complex I activity
  5. potentiates dopamine neuron death induced by microtubule dysfunction in a Parkinson's disease model. J Cell Biol. 2011 Mar 7;192(5):873-82. 
  6. Chu LJ, Yang H, Shih P, Kao Y, Tsai YS, Chen J, Huang G, Weng RR, Ting YS, Fang X, von Haller PD, Goodlett DR, Ng WV. Metabolic capabilities and systems fluctuations in Haloarcula marismortui revealed by integrative genomics and proteomics analyses. J Proteome Res. 2011 Jul 1;10(7):3261-73. 
  7. Cole TB, Beyer RP, Bammler TK, Park SS, Farin FM, Costa LG, Furlong CE. Repeated developmental exposure of mice to chlorpyrifos oxon is associated with paraoxonase 1 (PON1)-modulated effects on cerebellar gene expression. Toxicol Sci. 2011 Sep;123(1):155-69. 
  8. Cole TB, Jansen K, Park S, Li WF, Furlong CE, Costa LG. The toxicity of mixtures of specific organophosphate compounds is modulated by paraoxonase 1 status. Adv Exp Med Biol. 2010;660:47-60. 
  9. Costa LG, Giordano G. Is decabromodiphenyl ether (BDE-209) a developmental neurotoxicant? Neurotoxicology. 2011 Jan;32(1):9-24. 
  10. Costa LG, Giordano G, Furlong CE. Pharmacological and dietary modulators of paraoxonase 1 (PON1) activity and expression: the hunt goes on. Biochem Pharmacol. 2011 Feb 1;81(3):337-44. 
  11. Cox DP, White CC, Kavanagh TJ. Fluorescent assessment of intracellular calcium in individual cells. Methods Mol Biol. 2011;758:239-51. 
  12. Ehret GB et al. Genetic variants in novel pathways influence blood pressure and cardiovascular disease risk. Nature. 2011;478(7367):103-9.
  13. Gill EA, Curl CL, Adar SD, Allen RW, Auchincloss AH, O'Neill MS, Park SK, Van Hee VC, Diez Roux AV, Kaufman JD. Air pollution and cardiovascular disease in the Multi-Ethnic Study of Atherosclerosis. Prog Cardiovasc Dis. 2011 Mar-Apr;53(5):353-60. 
  14. Giordano G, Cole TB, Furlong CE, Costa LG. Paraoxonase 2 (PON2) in the mouse central nervous system: a neuroprotective role? Toxicol Appl Pharmacol. 2011 Nov 1;256(3):369-78. 
  15. Giordano G, Guizzetti M, Dao K, Mattison HA, Costa LG. Ethanol impairs muscarinic receptor-induced neuritogenesis in rat hippocampal slices: Role ofastrocytes and extracellular matrix proteins. Biochem Pharmacol. 2011 Dec1;82(11):1792-9. 
  16. Guizzetti M, Moore NH, VanDeMark KL, Giordano G, Costa LG. Muscarinic receptor-activated signal transduction pathways involved in the neuritogenic effect of astrocytes in hippocampal neurons. Eur J Pharmacol. 2011 Jun1;659(2-3):102-7. 
  17. Guizzetti M, Kavanagh TJ, Costa LG. Measurements of astrocyte proliferation. Methods Mol Biol. 2011;758:349-59. 
  18. Herr AJ, Ogawa M, Lawrence NA, Williams LN, Eggington JM, Singh M, Smith RA, Preston BD. Mutator suppression and escape from replication error-induced extinction in yeast. PLoS Genet. 2011 Oct;7(10):e1002282. 
  19. Jardine D, Cornel L, Emond M. Gene expression analysis characterizes antemortem stress and has implications for establishing cause of death. Physiol Genomics. 2011 Aug 24;43(16):974-80. Epub 2011 Jun 21. 
  20. Kisby GE, Fry RC, Lasarev MR, Bammler TK, Beyer RP, Churchwell M, Doerge DR, Meira LB, Palmer VS, Ramos-Crawford AL, Ren X, Sullivan RC, Kavanagh TJ, Samson LD, Zarbl H, Spencer PS. The cycad genotoxin MAM modulates brain cellular pathways involved in neurodegenerative disease and cancer in a DNA damage-linked manner. PLoS One. 2011;6(6):e20911 
  21. Nakamura BN, Fielder TJ, Hoang YD, Lim J, McConnachie LA, Kavanagh TJ, Luderer U. Lack of maternal glutamate cysteine ligase modifier subunit (Gclm) decreases oocyte glutathione concentrations and disrupts preimplantation development in mice. Endocrinology. 2011 Jul;152(7):2806-15. 
  22. Robinson JF, Yu X, Moreira EG, Hong S, Faustman EM. Arsenic- and cadmium-induced toxicogenomic response in mouse embryos undergoing neurulation. Toxicol Appl Pharmacol. 2011 Jan 15;250(2):117-29.
  23. Searles Nielsen S, Mueller BA, Preston-Martin S, Farin FM, Holly EA, McKean-Cowdin R. Childhood brain tumors and maternal cured meat consumption in pregnancy: differential effect by glutathione S-transferases. Cancer Epidemiol Biomarkers Prev. 2011 Nov;20(11):2413-9. 
  24. Shi M, Zhang J. CSF α-synuclein, tau, and amyloid β in Parkinson's disease. Lancet Neurol. 2011 Aug;10(8):681; author's reply 681-3. 
  25. Shi M, Sui YT, Peskind ER, Li G, Hwang H, Devic I, Ginghina C, Edgar JS, Pan C, Goodlett DR, Furay AR, Gonzalez-Cuyar LF, Zhang J. Salivary tau species are potential biomarkers of Alzheimer's disease. J Alzheimers Dis. 2011;27(2):299-305.
  26. Stamper BD, Mohar I, Kavanagh TJ, Nelson SD. Proteomic analysis of acetaminophen-induced changes in mitochondrial protein expression using spectral counting. Chem Res Toxicol. 2011 Apr 18;24(4):549-58. 
  27. Stamper BD, Park SS, Beyer RP, Bammler TK, Farin FM, Mecham B, Cunningham ML. Differential expression of extracellular matrix-mediated pathways in single-suture craniosynostosis. PLoS One. 2011;6(10):e26557 
  28. Tilton FA, Bammler TK, Gallagher EP. Swimming impairment and acetylcholinesterase inhibition in zebrafish exposed to copper or chlorpyrifos separately, or as mixtures. Comparative biochemistry and physiology Toxicology & pharmacology : CBP. 2011;153(1):9-16.
  29. Tilton FA, Tilton SC, Bammler TK, Beyer RP, Stapleton PL, Scholz NL, Gallagher EP. Transcriptional impact of organophosphate and metal mixtures on olfaction: copper dominates the chlorpyrifos-induced response in adult zebrafish. Aquat Toxicol. 2011 Apr;102(3-4):205-15. Epub 2011 Feb 2. PMID: 21356183.
  30. Ting YS, Shaffer SA, Jones JW, Ng WV, Ernst RK, Goodlett DR. Automated lipid A structure assignment from hierarchical tandem mass spectrometry data. J Am Soc Mass Spectrom. 2011 May;22(5):856-66. Epub 2011 Mar 5.
  31. Trabert B, Schwartz SM, Peters U, De Roos AJ, Chen C, Scholes D, Holt VL. Genetic variation in the sex hormone metabolic pathway and endometriosis risk: an evaluation of candidate genes. Fertility and sterility. 2011;96(6):1401-6.e3.
  32. Wang Z, Senn T, Kalhorn T, Zheng XE, Zheng S, Davis CL, Hebert MF, Lin YS, Thummel KE. Simultaneous measurement of plasma vitamin D(3) metabolites, including 4β,25-dihydroxyvitamin D(3), using liquid chromatography-tandem mass spectrometry. Anal Biochem. 2011 Nov 1;418(1):126-33.
  33. Weldy CS, White CC, Wilkerson HW, Larson TV, Stewart JA, Gill SE, Parks WC, Kavanagh TJ. Heterozygosity in the glutathione synthesis gene Gclm increases sensitivity to diesel exhaust particulate induced lung inflammation in mice. Inhal Toxicol. 2011 Oct;23(12):724-35. 
  34. Weldy CS, Wilkerson HW, Larson TV, Stewart JA, Kavanagh TJ. Diesel particulate exposed macrophages alter endothelial cell expression of eNOS, iNOS, MCP1, and glutathione synthesis genes. Toxicol In Vitro. 2011 Dec;25(8):2064-73. 
  35. Yu X, Sidhu JS, Hong S, Robinson JF, Ponce RA, Faustman EM. Cadmium induced p53-dependent activation of stress signaling, accumulation of ubiquitinated proteins, and apoptosis in mouse embryonic fibroblast cells. Toxicol Sci. 2011 Apr;120(2):403-12

2010

  1. Adar SD, Klein R, Klein BE, Szpiro AA, Cotch MF, Wong TY, O'Neill MS, Shrager S, Barr RG, Siscovick DS, Daviglus ML, Sampson PD, Kaufman JD. Air Pollution and the microvasculature: a cross-sectional assessment of in vivo retinal images in the population-based multi-ethnic study of atherosclerosis (MESA). PLoS Med. 2010 Nov 30;7(11):e1000372. 
  2. Bedogni F, Hodge RD, Elsen GE, Nelson BR, Daza RA, Beyer RP, Bammler TK, Rubenstein JL, Hevner RF. Tbr1 regulates regional and laminar identity of postmitotic neurons in developing neocortex. Proceedings of the National Academy of Sciences of the United States of America. 2010;107(29):13129-34. 
  3. Cao Y, Yao Z, Sarkar D, Lawrence M, Sanchez GJ, Parker MH, MacQuarrie KL, Davison J, Morgan MT, Ruzzo WL, Gentleman RC, Tapscott SJ. Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming. Developmental cell. 2010;18(4):662-74.
  4. Caudle WM, Bammler TK, Lin Y, Pan S, Zhang J. Using 'omics' to define pathogenesis and biomarkers of Parkinson's disease. Expert review of neurotherapeutics. 2010;10(6):925-42.
  5. Chakrabarti L, Zahra R, Jackson SM, Kazemi-Esfarjani P, Sopher BL, Mason AG, Toneff T, Ryu S, Shaffer S, Kansy JW, Eng J, Merrihew G, MacCoss MJ, Murphy A, Goodlett DR, Hook V, Bennett CL, Pallanck LJ, La Spada AR. Mitochondrial dysfunction in NnaD mutant flies and Purkinje cell degeneration mice reveals a role for Nna proteins in neuronal bioenergetics. Neuron. 2010;66(6):835-47. 
  6. Costa LG, Giordano G, Faustman EM. Domoic acid as a developmental neurotoxin. Neurotoxicology. 2010;31(5):409-23. 
  7. Echeverria D, Woods JS, Heyer NJ, Martin MD, Rohlman DS, Farin FM, Li T. The association between serotonin transporter gene promotor polymorphism (5-HTTLPR) and elemental mercury exposure on mood and behavior in humans. J Toxicol Environ Health A. 2010;73(15):1003-20. 
  8. Fang MZ, Zhang X, Zarbl H. Methylselenocysteine resets the rhythmic expression of circadian and growth-regulatory genes disrupted by nitrosomethylurea in vivo. Cancer prevention research (Philadelphia, Pa). 2010;3(5):640-52. 
  9. Firestone JA, Lundin JI, Powers KM, Smith-Weller T, Franklin GM, Swanson PD, Longstreth WT Jr, Checkoway H. Occupational factors and risk of Parkinson'sdisease: A population-based case-control study. Am J Ind Med. 2010 Mar;53(3):217-23.
  10. Fong PY, Fesinmeyer MD, White E, Farin FM, Srinouanprachanh S, Afsharinejad Z, Mandelson MT, Brentnall TA, Barnett MJ, Goodman GE, Austin MA. Association of diabetes susceptibility gene calpain-10 with pancreatic cancer among smokers. Journal of gastrointestinal cancer. 2010;41(3):203-8. 
  11. Fullerton SM, Anderson NR, Guzauskas G, Freeman D, Fryer-Edwards K. Meeting the governance challenges of next-generation biorepository research. Sci Transl Med. 2010 Jan 20;2(15):15cm3. 
  12. Furlong CE, Suzuki SM, Stevens RC, Marsillach J, Richter RJ, Jarvik GP, Checkoway H, Samii A, Costa LG, Griffith A, Roberts JW, Yearout D, Zabetian CP. Human PON1, a biomarker of risk of disease and exposure. Chemico-biological interactions. 2010;187(1-3):355-61. 
  13. Gorodkin J, Hofacker IL, Torarinsson E, Yao Z, Havgaard JH, Ruzzo WL. De novo prediction of structured RNAs from genomic sequences. Trends Biotechnol. 2010 Jan;28(1):9-19. 
  14. Gross-Steinmeyer K, Stapleton PL, Tracy JH, Bammler TK, Strom SC, Eaton DL. Sulforaphane- and phenethyl isothiocyanate-induced inhibition of aflatoxin B1-mediated genotoxicity in human hepatocytes: role of GSTM1 genotype and CYP3A4 gene expression. Toxicological sciences : an official journal of the Society of Toxicology. 2010;116(2):422-32. 
  15. Guizzetti M, Moore NH, Giordano G, VanDeMark KL, Costa LG. Ethanol inhibits neuritogenesis induced by astrocyte muscarinic receptors. Glia. 2010;58(12):1395-406.
  16. Hallstrand TS, Wurfel MM, Lai Y, Ni Z, Gelb MH, Altemeier WA, Beyer RP, Aitken ML, Henderson WR. Transglutaminase 2, a novel regulator of eicosanoid production in asthma revealed by genome-wide expression profiling of distinct asthma phenotypes. PLoS One. 2010 Jan 5;5(1):e8583. 
  17. Haque JA, McMahan RS, Campbell JS, Shimizu-Albergine M, Wilson AM, Botta D, Bammler TK, Beyer RP, Montine TJ, Yeh MM, Kavanagh TJ, Fausto N. Attenuated progression of diet-induced steatohepatitis in glutathione-deficient mice. Laboratory investigation; a journal of technical methods and pathology. 2010;90(12):1704-17.
  18. Hofmann JN, Checkoway H, Borges O, Servin F, Fenske RA, Keifer MC. Development of a computer-based survey instrument for organophosphate and N-methyl-carbamate exposure assessment among agricultural pesticide handlers. The Annals of occupational hygiene. 2010;54(6):640-50.
  19. Hofmann JN, Keifer MC, De Roos AJ, Fenske RA, Furlong CE, van Belle G, Checkoway H. Occupational determinants of serum cholinesterase inhibition among organophosphate-exposed agricultural pesticide handlers in Washington State. Occupational and environmental medicine. 2010;67(6):375-86.
  20. Huang SC, Giordano G, Costa LG. Comparative cytotoxicity and intracellular accumulation of five polybrominated diphenyl ether congeners in mouse cerebellar granule neurons. Toxicol Sci. 2010 Mar;114(1):124-32. 
  21. Jones JW, Cohen IE, Turecek F, Goodlett DR, Ernst RK. Comprehensive structure characterization of lipid A extracted from Yersinia pestis for determination of its phosphorylation configuration. Journal of the American Society for Mass Spectrometry. 2010;21(5):785-99. 
  22. Kang JW, Wilkerson HW, Farin FM, Bammler TK, Beyer RP, Strand SE, Doty SL. Mammalian cytochrome CYP2E1 triggered differential gene regulation in response to trichloroethylene (TCE) in a transgenic poplar. Functional & integrative genomics. 2010;10(3):417-24.
  23. Khojasteh SC, Oishi S, Nelson SD. Metabolism and toxicity of menthofuran in rat liver slices and in rats. Chemical research in toxicology. 2010;23(11):1824-32.
  24. Kicic A, Hallstrand TS, Sutanto EN, Stevens PT, Kobor MS, Taplin C, Pare PD, Beyer RP, Stick SM, Knight DA. Decreased fibronectin production significantly contributes to dysregulated repair of asthmatic epithelium. American journal of respiratory and critical care medicine. 2010;181(9):889-98. 
  25. Kim JH, Stevens RC, MacCoss MJ, Goodlett DR, Scherl A, Richter RJ, Suzuki SM, Furlong CE. Identification and characterization of biomarkers of organophosphorus exposures in humans. Adv Exp Med Biol. 2010;660:61-71. 
  26. Krejsa CM, Franklin CC, White CC, Ledbetter JA, Schieven GL, Kavanagh TJ. Rapid activation of glutamate cysteine ligase following oxidative stress. The Journal of biological chemistry. 2010;285(21):16116-24. 
  27. Liu J, Shi M, Hong Z, Zhang J, Bradner J, Quinn T, Beyer RP, McGeer PL, Chen S, Zhang J. Identification of ciliary neurotrophic factor receptor alpha as a mediator of neurotoxicity induced by alpha-synuclein. Proteomics. 2010;10(11):2138-50.
  28. Mackenzie Ross SJ, Brewin CR, Curran HV, Furlong CE, Abraham-Smith KM, Harrison V. Neuropsychological and psychiatric functioning in sheep farmers exposed to low levels of organophosphate pesticides. Neurotoxicology and teratology. 2010;32(4):452-9. 
  29. Mefford HC, Shafer N, Antonacci F, Tsai JM, Park SS, Hing AV, Rieder MJ, Smyth MD, Speltz ML, Eichler EE, Cunningham ML. Copy number variation analysis in single-suture craniosynostosis: multiple rare variants including RUNX2 duplication in two cousins with metopic craniosynostosis. American journal of medical genetics Part A. 2010;152a(9):2203-10.
  30. Moreira EG, Yu X, Robinson JF, Griffith W, Hong SW, Beyer RP, Bammler TK, Faustman EM. Toxicogenomic profiling in maternal and fetal rodent brains following gestational exposure to chlorpyrifos. Toxicology and applied pharmacology. 2010;245(3):310-25. 
  31. Morris RM, Nunn BL, Frazar C, Goodlett DR, Ting YS, Rocap G. Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction. The ISME journal. 2010;4(5):673-85. 
  32. Preston BD, Albertson TM, Herr AJ. DNA replication fidelity and cancer. Seminars in cancer biology. 2010;20(5):281-93. 
  33. Robinson JF, Griffith WC, Yu X, Hong S, Kim E, Faustman EM. Methylmercury induced toxicogenomic response in C57 and SWV mouse embryos undergoing neural tube closure. Reproductive toxicology (Elmsford, NY). 2010;30(2):284-91. 
  34. Richter RJ, Jarvik GP, Furlong CE. Paraoxonase 1 status as a risk factor for disease or exposure. Adv Exp Med Biol. 2010;660:29-35. 
  35. Robinson JF, Guerrette Z, Yu X, Hong S, Faustman EM. A systems-based approach to investigate dose- and time-dependent methylmercury-induced gene expression response in C57BL/6 mouse embryos undergoing neurulation. Birth defects research Part B, Developmental and reproductive toxicology. 2010;89(3):188-200. 
  36. Robinson JF, Port JA, Yu X, Faustman EM. Integrating genetic and toxicogenomic information for determining underlying susceptibility to developmental disorders. Birth defects research Part A, Clinical and molecular teratology. 2010;88(10):920-30. 
  37. Robinson JF, Yu X, Hong S, Zhou C, Kim N, DeMasi D, Faustman EM. Embryonic toxicokinetic and dynamic differences underlying strain sensitivity to cadmium during neurulation. Reproductive toxicology (Elmsford, NY). 2010;29(3):279-85. 
  38. Rohani MG, Beyer RP, Hacker BM, Dommisch H, Dale BA, Chung WO. Modulation of expression of innate immunity markers CXCL5/ENA-78 and CCL20/MIP3alpha by protease-activated receptors (PARs) in human gingival epithelial cells. Innate immunity. 2010;16(2):104-14. 
  39. Rostomily RC, Born DE, Beyer RP, Jin J, Alvord EC, Jr., Mikheev AM, Matthews RT, Pan C, Khorasani L, Sonnen JA, Montine TJ, Shi M, Zhang J. Quantitative proteomic analysis of oligodendrogliomas with and without 1p/19q deletion. Journal of proteome research. 2010;9(5):2610-8.
  40. Searles Nielsen S, McKean-Cowdin R, Farin FM, Holly EA, Preston-Martin S, Mueller BA. Childhood brain tumors, residential insecticide exposure, and pesticide metabolism genes. Environ Health Perspect. 2010 Jan;118(1):144-9. 
  41. Shao J, Dabrowski MJ, White CC, Kavanagh TJ, Gallagher EP. Flow cytometric analysis of BDE 47 mediated injury to rainbow trout gill epithelial cells. Aquatic toxicology (Amsterdam, Netherlands). 2010;97(1):42-50. 
  42. Stamper BD, Bammler TK, Beyer RP, Farin FM, Nelson SD. Differential regulation of mitogen-activated protein kinase pathways by acetaminophen and its nonhepatotoxic regioisomer 3'-hydroxyacetanilide in TAMH cells. Toxicological sciences : an official journal of the Society of Toxicology. 2010;116(1):164-73. 
  43. Suzuki M, Pritchard DK, Becker L, Hoofnagle AN, Tanimura N, Bammler TK, Beyer RP, Bumgarner R, Vaisar T, de Beer MC, de Beer FC, Miyake K, Oram JF, Heinecke JW. High-density lipoprotein suppresses the type I interferon response, a family of potent antiviral immunoregulators, in macrophages challenged with lipopolysaccharide. Circulation. 2010;122(19):1919-27. 
  44. Suzuki SM, Stevens RC, Richter RJ, Cole TB, Park S, Otto TC, Cerasoli DM, Lenz DE, Furlong CE. Engineering human PON1 in an E. coli expression system. Adv Exp Med Biol. 2010;660:37-45. 
  45. Treuting PM, Albertson TM, Preston BD. Case series: acute tumor lysis syndrome in mutator mice with disseminated lymphoblastic lymphoma. Toxicologic pathology. 2010;38(3):476-85. 
  46. Vaisar T, Mayer P, Nilsson E, Zhao XQ, Knopp R, Prazen BJ. HDL in humans with cardiovascular disease exhibits a proteomic signature. Clinica chimica acta; international journal of clinical chemistry. 2010;411(13-14):972-9. 
  47. Van Hee VC, Adar SD, Szpiro AA, Barr RG, Diez Roux A, Bluemke DA, Sheppard L, Gill EA, Bahrami H, Wassel C, Sale MM, Siscovick DS, Rotter JI, Rich SS, Kaufman JD. Common genetic variation, residential proximity to traffic exposure, and left ventricular mass: the multi-ethnic study of atherosclerosis. Environmental health perspectives. 2010;118(7):962-9. 
  48. Van Hee VC, Kaufman JD, Budinger GR, Mutlu GM. Update in environmental and occupational medicine 2009. American journal of respiratory and critical care medicine. 2010;181(11):1174-80. 
  49. Woods JS, Armel SE, Fulton DI, Allen J, Wessels K, Simmonds PL, Granpeesheh D, Mumper E, Bradstreet JJ, Echeverria D, Heyer NJ, Rooney JP. Urinary porphyrin excretion in neurotypical and autistic children. Environmental health perspectives. 2010;118(10):1450-7. 
  50. Yu X, Robinson JF, Sidhu JS, Hong S, Faustman EM. A system-based comparison of gene expression reveals alterations in oxidative stress, disruption of ubiquitin-proteasome system and altered cell cycle regulation after exposure to cadmium and methylmercury in mouse embryonic fibroblast. Toxicological sciences : an official journal of the Society of Toxicology. 2010;114(2):356-77. 
  51. Yu M, Xiang F, Beyer RP, Farin FM, Bammler TK, Chin MT. Transcription Factor CHF1/Hey2 Regulates Specific Pathways in Serum Stimulated Primary Cardiac Myocytes: Implications for Cardiac Hypertrophy. Current genomics. 2010;11(4):287-96.