A. Refereed Research Articles
It is customary in Toxicology, Neurobiology and Signal Transduction Biology for students and postdoctoral fellows to be listed as the first author while the PI is indicated as the senior author by assuming the last position on journal publications. Those articles in which I am the senior author as PI are marked by **.
- Xia, Z., Zhu, R., Cao, X., and Zou, G. (1987) Purification and characterization of restriction endonuclease Bsp 78I. Acta Biochim. Biophys. Sinica (Chinese). 19: 27-34.
- Tota, M. R., Xia, Z., Storm, D. R., and Schimerlik, M. I. (1990): Reconstitution of Muscarinic Receptor Mediated Inhibition of Adenylyl Cyclase. Mol. Pharmacol. 37: 950-957.
- Xia, Z . and Storm, D. R. (1990): A-Type ATP Binding Consensus Sequence is Critical for the Catalytic Activity of the Calmodulin Sensitive Adenylate Cyclase from Bacillus anthracis. J. Biol. Chem. 265: 6517-6520.
- Xia, Z., Refsdal, C. D. R., Merchant, K. M., Dorsa, D. M., and Storm, D. R. (1991) Distinct Patterns for the Distribution of mRNA for the Calmodulin-Sensitive Adenylate Cyclase in Rat Brain: Expression in Areas Associated with Learning and Memory. Neuron 6: 431-443.
- Choi, E. J., Xia, Z. and Storm, D. R. (1992) Stimulation of the Type III Olfactory Adenylyl Cyclase by Calcium and Calmodulin. Biochem. 31: 6492-6498.
- Xia, Z., Choi, E. J., Wang, F., and Storm, D. R. (1992) The Type III Calcium/Calmodulin Sensitive Adenylyl Cyclase is not Specific to Olfactory Sensory Neurons. Neurosci. Lett. 144: 169-173.
- Xia, Z., Choi, E. J., Wang, F., Blazynski C., and Storm, D. R. (1993) The Type I Calmodulin Sensitive Adenylyl Cyclase Is Neural Specific. J. Neurochem. 60: 305 311.
- Villacres, E. C., Xia, Z., Bookbinder, L. H., Edelhoff, S., Adler, D. A., Disteche, C. M., and Storm, D. R. (1993) Cloning, Chromosomal Mapping, and Expression of Human Fetal Brain Type I Adenylyl Cyclase. Genomics 16: 473-478.
- Wu, Z., Thomas, S. A., Xia, Z., Villacres, E. C., Palmiter, R. D., and Storm, D. R. (1995) Deficient Spatial Memory and Altered LTP in Type I Adenylyl Cyclase Mutant Mice. Proc. Natl. Acad. Sci. USA 92:220-224.
- Xia, Z., Dickens, M., Raingeaud, J., Davis, R. J., Greenberg, M. E. (1995) Opposing Effects of ERK and JNK-p38 MAP Kinases on Apoptosis. Science (Research Article) 270:1326-1331.
Note: Reference #10 was recently selected as a highly cited paper in the field of Biology & Biochemistry by ISI Essential Science Indicators (ESI). According to the ISI Essential Science Indicators Web product, this paper was ranked at #9 among Clinical Medicine papers published in the past decade, with 2,462 citations as of June 2004. (http://www.incites.com/papers/DrZhenguiXia.html) - Xia, Z., Dudek, H., Miranti, C. K., Greenberg, M. E. (1996) Calcium Influx via the NMDA Receptor Induces Immediate Early Gene Transcription by a MAP Kinase/ERK Dependent Mechanism. J. Neurosci. 16(17): 5425-5436.
- Dickens, M., Rogers, J., Cavanagh, J., Raitano, A., Xia, Z., Halpern, J. R., Greenberg, M. E., Sawyers, C. L., Davis, R. J. (1997) A cytoplasmic inhibitor of the JNK signal transduction pathway. Science 277: 693-696.
- Xing, J., Kornhauser, J. M., Xia, Z., Thiele, E. A., and Greenberg, M. E. (1998) Nerve growth factor activates extracellular signal-regulated kinase and p38 mitogen-activated protein kinase pathways to stimulate CREB serine 133 phosphorylation. Mol. Cell. Biol. 18(4): 1946-1955.
- Yue, T. L., J. Niá, A. M Romanic, J. L. Gu, P. Keller, C. Wang, S. Kumar, G. L.Yuá, T. K. HartÜ, X. Wang, Z. Xia, W. E. DeWolf Jr and G. Z. Feuerstein (1999) TL1, a Novel TNF-like Cytokine, Induces Apoptosis in Endothelial Cells: Involvement of Activation of Stress Protein Kinases (stress-activated protein kinase and p38 mitogen-activated protein kinase) and Caspase-3 Like Protease . J. Biol. Chem. 274:1479-1486, 1999
- **Hetman, M., Kanning, K., Smith-Cavanaugh, J. E. and Xia, Z. (1999) Neuroprotection by Brain-Derived Neurotrophic Factor Is Mediated by Extracellular-Signal-Regulated Kinase and Phosphatidylinositol-3 Kinase. J. Biol. Chem. 274: 22569-22580.
- **Hetman, M., Smith-Cavanaugh, J. E., Kimelman, D. and Xia, Z., (2000) Role of Glycogen Synthase Kinase-3b in Neuronal Apoptosis Induced by Trophic Withdrawal. J. Neurosci. 20(7):2567-2574.
- **Namgung, Uk. and Xia, Z.(2000) Arsenite-Induced Apoptosis in Cortical Neurons Is Mediated by c-Jun N-Terminal Protein Kinase 3 and p38 Mitogen-Activated Protein Kinase. J. Neurosci. 20(17): 6442-6451.
- Ghatan, S., Larner, S., Kinoshita, Y., Hetman, M., Patel, L., Xia, Z., Youle, R. J., Morrison, R. S. (2000) p38 Mitogen activated protein kinase mediates Bax translocation and caspase induction in nitric oxide-induced apoptosis in neurons. J. Cell Biol. 150 (2): 335-347.
- Poser, S., Impey, K., Trinh, K., Xia, Z., and Storm, D. R. (2000) SRF-dependent gene expression is required for mitogen-induced proliferation through a PI3 kinase signal transduction cascade. EMBO J. 19 (18): 4955-4966.
- Scott T. Wong, Kien Trinh, Jia Wei, Graeme Lowe, Anuj Gaggar, Zhengui Xia, Geoffrey H. Gold and Daniel R. Storm. (2000) Disruption of the Type III Adenylyl Cyclase Gene Leads to Peripheral and Behavioral Anosmia in Transgenic Mice. Neuron 27: 487-497.
- **Cavanaugh, J. E., Ham, J., Hetman, M., Poser, S., Yan, C., and Xia, Z. (2001) Differential Regulation of Mitogen Activated Protein Kinases ERK1/2 and ERK5 by Neurotrophins, Neuronal Activity and cAMP in Neurons. J. Neurosci. 21(2): 434-443.
- **Figueroa Masot, X. A., Hetman, M., Higgins, M., Kokot, N., Xia, Z.(2001) Differential Role of Bcl-2 Phosphorylation in Paclitaxel (Taxol)-Induced Apoptosis in Post-Mitotic Neurons and Proliferating HEK 293 Cells. J. Neurosci. 21(13):4657-67.
- **Namgung, Uk., and Xia, Z. (2001) Arsenic induces apoptosis in rat cerebellar neurons which requires activation of JNK 3 and p38 MAP kinases. Toxicol. Appl. Pharmacol. 174(2): 130-8.
- Chan, G. C. K., Lernmark, U., Xia, Z. and Storm D. R. (2001) DNA Elements of the Type I Adenylyl Cyclase Gene Locus Enhance Reporter Gene Expression in Neurons and Pinealocytes. Eur. J. Neurosci. 13 (11), 2054-2066.
- Mabuchi, T., Kitagawa, K., Kuwabara, K., Takasawa, K., Ohtsuki,T., Xia, Z., Storm, D., Yanagihara, T., Hori, M., Matsumoto, M. (2001) Phopshorylation of cAMP response element-binding protein in hippocampal neurons as a protective response after exposure to glutamate in vitro and ischemia in vivo. J. Neurosci. 21:9204-13.
- Kornhauser JM, Cowan CW, Shaywitz AJ, Dolmetsch RE, Griffith EC, Hu LS, Haddad C, Xia Z, Greenberg ME. (2002) CREB transcriptional activity in neurons is regulated by multiple, calcium-specific phosphorylation events. Neuron 34: 221-233.
- Zhu Y, Mao XO, Sun Y, Xia Z, Greenberg DA.(2002) p38 Mitogen-activated Protein Kinase Mediates Hypoxic Regulation of Mdm2 and p53 in Neurons. J. Biol. Chem. 277(25):22909-14.
- Ghahremani MH, Keramaris E, Shree T, Xia Z, Davis RJ, Flavell R, Slack RS, Park DS. (2002). Interaction of the c-Jun/JNK pathway and cyclin-dependent kinases in death of embryonic cortical neurons evoked by DNA damage. J. Biol. Chem. 277(38):35586-96.
- **Hetman M, Hsuan SL, Habas A, Higgins MJ, Xia Z. (2002) ERK1/2 Antagonizes Glycogen Synthase Kinase-3beta -induced Apoptosis in Cortical Neurons. J. Biol. Chem. 277(51):49577-49584.
- Poser, S. , Impey, S., Xia, Z. and Storm, D. R. (2003) Brain-derived neurotrophic factor protection of cortical neurons from serum withdrawal-induced apoptosis is inhibited by cAMP. (2003) J. Neurosci. 23(11):4420-7.
- **Caughlan, A., Newhouse, K., Namgung, U. and Xia, Z. (2004) Chlorpyrifos Induces Apoptosis In Rat Cortical Neurons That Is Regulated By A Balance Between p38 And ERK/JNK MAP Kinases. Tox. Sci. 78(1): 125-34.
- **Liu, L., Cavanaugh, J. E., Wang, Y., Sakagami, H., Mao, Z., and Xia, Z. (2003) ERK5 Activation of MEF2-Mediated Gene Expression Plays A Critical Role In BDNF-Promoted Survival of Developing But Not Mature Cortical Neurons. Proc. Natl. Acad. Sci. USA 100(14): 8532-8537. (PMCID: PMC166263)
- **Uk Namgung, dong-Hee Kim, Scok-Rhi Lim, Zhengui Xia (2003) Blockade of calcium entry accelerates arsenite-mediated apoptosis in rat cerebellar granule cells. Molecules and Cells 15: 256.
- **Kathleen Newhouse*, Shih-Ling Hsuan, Sandra H. Chang*, Beibei Cai*, Yupeng Wang*, and Zhengui Xia (2004). Rotenone-Induced Apoptosis Is Mediated By p38 And JNK MAP Kinases In Human Dopaminergic SH-SY5Y Cells. Tox. Sci. 79: 137-146.
- **Sandra H. Chang, Steve Poser, and Zhengui Xia (2004). A Novel Role For Serum Response Factor In Neuronal Survival . J. Neurosci. 24 (9): 2277-85.
- Tang X, Wang X, Gong X, Tong M, Park D, Xia Z, Mao Z. Cyclin-dependent kinase 5 mediates neurotoxin-induced degradation of the transcription factor myocyte enhancer factor 2. J. Neurosci. 2005: 25(19):4823-3.
- **Shih-Ling Hsuan, Heather M. Klintworth, and Zhengui Xia. (2006) Basic Fibroblast Growth Factor Protects Dopaminergic Cells against Rotenone Toxicity through activation of the Extracellular-Signal-Regulated Kinases 1/2 and Phosphatidylinositol-3 Kinase. J. Neurosci. 26:4481-91.
- **Lidong Liu , Paige Cundiff , Glen Abel , Yupeng Wang , Roland Faigle , Hiroyuki Sakagami, Mei Xu, Zhengui Xia (2006) Extracellular Signal-Regulated Kinase (ERK) 5 Is Necessary and Sufficient to Specify Cortical Neuronal Fate. Proc. Natl. Acad. Sci. USA. 103(25):9697-702. Epub 2006 Jun 9. (PMCID: PMC1480469)
- **Beibei Cai, Esther B. E. Becker, Azad Bonni, and Zhengui Xia. (2006) p38 MAP Kinase Mediates Apoptosis Through Phosphorylation of BimEL At Ser65. J. Biol. Chem. 281(35):25215-22. Epub 2006 Jul 3.
- **Yupeng Wang, Bing Su, and Zhengui Xia. (2006) BDNF Activates ERK5 In Cortical Neurons via a Rap1-MEKK2 Signaling Cascade J. Biol. Chem. 281 (47): 35965-74. Epub 2006 Sept 25. (PMID: 17003042)
- **Cude K, Wang Y, Choi HJ, Hsuan SL, Zhang HL, Wang CY, and Xia Z. (2007) Regulation of the G2/M Cell Cycle Progression by the ERK5-NFkB Signaling Pathway. J. Cell Biol. 177 (2): 253-64. (PMCID: PMC2064134)
- **Heather Klintworth, Kathleen Newhouse, Ting-ting Li, Roland Faigle, Won-Seok Choi, Zhengui Xia. (2007) Activation of c-Jun N-terminal Protein Kinase is a Common Mechanism Underlying Paraquat- and Rotenone-Induced Dopaminergic Cell Death. Tox. Sci. 97(1): 149-62. (PMID: 17324951).
- **Yupeng Wang, Lidong Liu, and Zhengui Xia (2007). BDNF stimulates the transcriptional a (nd neuroprotective activity of myocyte-enhancer factor 2C through an ERK1/2-RSK2 signaling cascade. J. Neurochem. 102(3): 957-66. (PMID: 17630987)
- **Roland Faigle, Lidong Liu, Keiko Funa, and Zhengui Xia. (2008) Opposing effects of retinoid signaling on astroglial differentiation in progenitor cells derived from Embryonic day 13 and day 17 cortex. J. Neurochem. 106(4): 1681-98. (PMCID: PMC2581522)
- **Beibei Cai and Zhengui Xia. (2008) p38 MAP Kinase Mediates Arsenite-Induced Apoptosis through FOXO3a Activation and Induction of Bim Transcription. Apoptosis: 13:803–810. (PMCID: PMC2442769)
- **Choi WS, Kruse SE, Palmiter RD, and Xia Z. (2008) Mitochondrial complex I inhibition is not required for dopaminergic neuron death induced by rotenone, MPP+, or paraquat. PNAS USA: 105: 15136-41. (PMCID: PMC2567505).
- **Cundiff P, Liu L, Wang Y, Zou J, Pan Y, Abel G, Duan X, Ming G, Englund C, Hevner R, Xia Z. (2009) ERK5 MAP Kinase Regulates Neurogenin1 During Cortical Neurogenesis. PLoS One: 4(4):e5204. Epub 2009 Apr 13. (PMCID: PMC2664926).
- **Klintworth H, Garden G, Xia Z.. Rotenone and Paraquat do not Directly Activate Microglia or Induce Inflammatory Cytokine Release. (2009) Neurosci. Lett: 462: 1-5 (PMCID: PMC2796146).
- Wang Z, Li V, Chan GC, Phan T, Nudelman AS, Xia Z and Storm DR (2009) Adult Type 3 Adenylyl Cyclase Deficient Mice are Obese. (2009) PLoS ONE: 4: e6979. (PMCID: PMC2735775).
- **Choi WS, Abel G, Klintworth H, Flavell R. and Xia Z. JNK3 Mediates Paraquat- and Rotenone-Induced Dopaminergic Neuron Death. (2010) J. Neuropathol. Exp. Neurol.: 69(5):511-20. (PMCID: PMC3061491)
- **Choi WS, Palmiter RD, and Xia Z. Loss of mitochondrial complex I activity potentiates dopamine neuron death induced by microtubule dysfunction in a Parkinson's disease model. (2011) J. Cell Biol. 192: (5): 873-882 (PMCID: PMC3051820 [PubMed - in process])
- **Zou J, Pan YW, Wang Z, Chang SH, Wang WB, Wang X, Tournier C,, Storm DR, and Xia Z (2012) Targeted Deletion of ERK5 MAP Kinase in the Developing Nervous System Impairs Development of GABAergic Interneurons in the Main Olfactory Bulb and Behavioral Discrimination between Structurally Similar Odorants. J. Neurosci. 32 (12):4118-4132.
- **Pan YW, Zou J, Sakagami H, Garelick MG, Kuo CT, Storm DR, and Xia Z. ERK5 MAP Kinase is necessary and sufficient for regulating adult hippocampal neurogenesis (under revision at J. Biol. Chem).
- **Pan YW, Chan GCK, Kuo CT, Storm DR, and Xia Z. (2012) Inhibition of Adult Neurogenesis by Inducible and Targeted Deletion of ERK5 MAP Kinase Specifically in Adult Neurogenic Regions Impairs Contextual Fear Memory Extinction and Remote Fear Memory. J. Neurosci. (in press)
- **Wang WB, Pan YW, Xia, Z. ERK5 MAP kinase signals mating-induced adult neurogenesis (submitted)
- **Choi WS, Kim HW, Xia Z. Preparation of Primary Cultured Dopaminergic Neurons from Mouse Brain. Invited book chapter in “Methods in Molecular Biology”, Humana Press. (submitted)
Note: This paper is highlighted as one of the key papers appearing in that issue of the journal and is discussed in a section called “In This Issue”.
Note: This paper is highlighted as one of the key papers appearing in that issue of the journal and is discussed in a section called “In Focus”, by Ben Short, The wrong suspect? (2011) J. Cell Biol. 192: (5): 707.
B. Refereed review articles
Choi E. J., Xia, Z., Villacres, E. C., and Storm, D. R. (1993) The Regulatory Diversity of the Mammalian Adenylyl Cyclases. Cur. Opin. Cell Biol. 5: 269-273.
Villacres. E. C., Xia, Z., Choi, E. J., and Storm, D. R. (1993) Calmodulin Regulation of Mammalian Adenylyl Cyclases. Cur. Topics in Mol. Pharmacol. 1: 51-54.
Xia, Z., Choi E. J., Blazynski, C., and Storm, D. R. (1995) Do the Calmodulin Stimulated Adenylyl Cyclases Play a Role in Neuroplasticity? Behav. and Brain Sci. 18 (3): 429-440.
Xia, Z. and Storm, D. R. (1997) Calmodulin-regulated adenylyl cyclases and neuromodulation. Cur. Opin. Neurobiol. 7(3):391-396.
** Xia, Z. (2002) Adenylyl cyclases. Wiley Encyclopedia of Molecular Medicine. Edited by T. A. Creighton. 5: 79-82.
** Hetman M, Xia Z (2000) Signaling pathways mediating anti-apoptotic action of neurotrophins. Acta Neurobiol. Exp. 60:531-545.
Xia, Z. and Storm, D. R. (2002) CaRF, a Neuronal Transcription Factor that CaREs. Neuron 33: 315-316.
Xia Z, Storm DR. (2005) The role of calmodulin as a signal integrator for synaptic plasticity. Nat. Rev. Neurosci. 6(4):267-76.
**Dirocco, DP and Xia, Z (2007) Alpha males win again. Nat Neurosci. 10(8): 938-40.
** Won-Seok Choi*, Heather M Klintworth*, Zhengui Xia. JNK3-Mediated Apoptotic Cell Death in Primary Dopaminergic Neurons. Methods Mol Biol. 2011;758:279-292.
PMID: 21815073
C. Books
Xia, Z. and Storm, D. R. (1996) The Mammalian Adenylyl Cyclases. R. G. Landes Co. Mol. Bio. Intelligence Unit.




