Julia Cui, Director
Yvonne Lin, Co-Director, Metabolomics
Kathleen Kerr, Co-Director, Biostatistics
Ed Kelly, Microphysiological Systems
Theo Bammler, Manager
Contact Person: Theo Bammler
Email: tbammler@uw.edu
Phone: 206-616-7378
Services:
- Global transcriptome and miRNA profiling using microarrays
- Global transcriptome profiling using massively parallel sequencing (RNA-seq)
- Targeted mRNA, microRNA, and lincRNA gene expression profiling (low and medium throughput)
- Single nucleotide polymorphism (SNP) analysis using microarrays
- Targeted genotyping of single nucleotide polymorphisms (SNPs)
- Targeted genotyping of SNPs in Drug Metabolism Enzymes and Transporter genes (DMET)
- Targeted genotyping of SNPs for ancestry characterization
- Methylation profiling using targeted enrichment, bisulfite conversion, and massively parallel sequencing
- Targeted DNA methylation profiling
- Genome-wide copy number variation survey using microarrays
- Targeted copy number variation analysis
- In situ hybridization using QuantiGene ViewRNA Assays for mRNA and microRNA
- Support preparation and review of manuscripts and grant proposals
- Basic proteomic services include:
- Consultation on experimental design, including sample preparation
- Assistance with finding collaborators to perform discovery proteomics
- Assistance with getting experiments addressed at UW Proteomics Centers
- Typical mass spec runs
- Investigations on post-translational modifications
- Mass spec based peptide quantifications (e.g. SIM and MRM methods)
- Consultation on data analysis
- Consultation on protein validation by ELISA, Luminex (fluorescent bead- or magnetic bead-based), or TaqMan assays
- Perform protein validation by ELISA, Luminex (fluorescent beador magnetic bead-based), or TaqMan assays
- Facilitating metabolomics analysis